Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SPTSSBQ8NFR3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
SPTSSBQ8NFR3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC10.88□□□□□ -0.67
SPTSSBQ8NFR3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SPTSSBQ8NFR3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
SPTSSBQ8NFR3 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SPTSSBQ8NFR3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SPTSSBQ8NFR3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SPTSSBQ8NFR3 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
SPTSSBQ8NFR3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SPTSSBQ8NFR3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SPTSSBQ8NFR3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
SPTSSBQ8NFR3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SPTSSBQ8NFR3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
SPTSSBQ8NFR3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SPTSSBQ8NFR3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SPTSSBQ8NFR3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC10.88□□□□□ -0.67
SPTSSBQ8NFR3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
SPTSSBQ8NFR3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SPTSSBQ8NFR3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SPTSSBQ8NFR3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SPTSSBQ8NFR3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
SPTSSBQ8NFR3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SPTSSBQ8NFR3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SPTSSBQ8NFR3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC10.88□□□□□ -0.67
SPTSSBQ8NFR3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 SMPD5-203ENST00000639008 1464 ntBASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 PRORSD1P-202ENST00000563365 2154 ntBASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 DKFZP434A062-201ENST00000573103 5021 ntBASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 AC124067.4-201ENST00000519691 2379 ntBASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 AC067930.6-201ENST00000623257 4947 ntBASIC10.87□□□□□ -0.67
SPTSSBQ8NFR3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SPTSSBQ8NFR3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
SPTSSBQ8NFR3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SPTSSBQ8NFR3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
SPTSSBQ8NFR3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SPTSSBQ8NFR3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SPTSSBQ8NFR3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
SPTSSBQ8NFR3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC10.86□□□□□ -0.67
SPTSSBQ8NFR3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC10.86□□□□□ -0.67
SPTSSBQ8NFR3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
SPTSSBQ8NFR3 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SPTSSBQ8NFR3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SPTSSBQ8NFR3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
SPTSSBQ8NFR3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SPTSSBQ8NFR3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC10.86□□□□□ -0.67
SPTSSBQ8NFR3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
SPTSSBQ8NFR3 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SPTSSBQ8NFR3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SPTSSBQ8NFR3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SPTSSBQ8NFR3 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
SPTSSBQ8NFR3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SPTSSBQ8NFR3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms