Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF439Q8NDP4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
ZNF439Q8NDP4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF439Q8NDP4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF439Q8NDP4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF439Q8NDP4 MKRN4P-201ENST00000444706 1521 ntBASIC16.39■□□□□ 0.21
ZNF439Q8NDP4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF439Q8NDP4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF439Q8NDP4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZNF439Q8NDP4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF439Q8NDP4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.38■□□□□ 0.21
ZNF439Q8NDP4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.38■□□□□ 0.21
ZNF439Q8NDP4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF439Q8NDP4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
ZNF439Q8NDP4 AFG3L1P-217ENST00000557444 2447 ntBASIC16.38■□□□□ 0.21
ZNF439Q8NDP4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
ZNF439Q8NDP4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF439Q8NDP4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF439Q8NDP4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
ZNF439Q8NDP4 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF439Q8NDP4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF439Q8NDP4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.38■□□□□ 0.21
ZNF439Q8NDP4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.38■□□□□ 0.21
ZNF439Q8NDP4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.38■□□□□ 0.21
ZNF439Q8NDP4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.38■□□□□ 0.21
ZNF439Q8NDP4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.38■□□□□ 0.21
ZNF439Q8NDP4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF439Q8NDP4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF439Q8NDP4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF439Q8NDP4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF439Q8NDP4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.38■□□□□ 0.21
ZNF439Q8NDP4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF439Q8NDP4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF439Q8NDP4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF439Q8NDP4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ZNF439Q8NDP4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF439Q8NDP4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF439Q8NDP4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF439Q8NDP4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF439Q8NDP4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF439Q8NDP4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF439Q8NDP4 LSM12P1-201ENST00000411836 588 ntBASIC16.37■□□□□ 0.21
ZNF439Q8NDP4 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.37■□□□□ 0.21
ZNF439Q8NDP4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.37■□□□□ 0.21
ZNF439Q8NDP4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.37■□□□□ 0.21
ZNF439Q8NDP4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.37■□□□□ 0.21
ZNF439Q8NDP4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
ZNF439Q8NDP4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZNF439Q8NDP4 KRT8P20-201ENST00000423953 1409 ntBASIC16.36■□□□□ 0.21
ZNF439Q8NDP4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF439Q8NDP4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF439Q8NDP4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF439Q8NDP4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF439Q8NDP4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF439Q8NDP4 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.36■□□□□ 0.21
ZNF439Q8NDP4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.36■□□□□ 0.21
ZNF439Q8NDP4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF439Q8NDP4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
ZNF439Q8NDP4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
ZNF439Q8NDP4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF439Q8NDP4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF439Q8NDP4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
ZNF439Q8NDP4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.36■□□□□ 0.21
ZNF439Q8NDP4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.36■□□□□ 0.21
ZNF439Q8NDP4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF439Q8NDP4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF439Q8NDP4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF439Q8NDP4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF439Q8NDP4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF439Q8NDP4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF439Q8NDP4 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF439Q8NDP4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF439Q8NDP4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
ZNF439Q8NDP4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
ZNF439Q8NDP4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZNF439Q8NDP4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 TMEM179-206ENST00000616017 1645 ntBASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 BX276092.2-201ENST00000417668 665 ntBASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 AC023632.3-201ENST00000521633 145 ntBASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 AL121832.2-201ENST00000610979 668 ntBASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZNF439Q8NDP4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms