Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.58■□□□□ 0.72
EFCAB3Q8N7B9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.58■□□□□ 0.72
EFCAB3Q8N7B9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.58■□□□□ 0.72
EFCAB3Q8N7B9 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.58■□□□□ 0.72
EFCAB3Q8N7B9 AC133552.2-202ENST00000575694 574 ntBASIC19.58■□□□□ 0.72
EFCAB3Q8N7B9 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.58■□□□□ 0.72
EFCAB3Q8N7B9 AC243732.1-201ENST00000612648 864 ntBASIC19.58■□□□□ 0.72
EFCAB3Q8N7B9 AP006294.2-201ENST00000641667 209 ntBASIC19.58■□□□□ 0.72
EFCAB3Q8N7B9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.58■□□□□ 0.72
EFCAB3Q8N7B9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EFCAB3Q8N7B9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.58■□□□□ 0.72
EFCAB3Q8N7B9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
EFCAB3Q8N7B9 AC092720.2-201ENST00000602388 1665 ntBASIC19.58■□□□□ 0.72
EFCAB3Q8N7B9 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EFCAB3Q8N7B9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
EFCAB3Q8N7B9 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
EFCAB3Q8N7B9 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.58■□□□□ 0.72
EFCAB3Q8N7B9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.58■□□□□ 0.72
EFCAB3Q8N7B9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
EFCAB3Q8N7B9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
EFCAB3Q8N7B9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
EFCAB3Q8N7B9 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EFCAB3Q8N7B9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.57■□□□□ 0.72
EFCAB3Q8N7B9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EFCAB3Q8N7B9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EFCAB3Q8N7B9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.57■□□□□ 0.72
EFCAB3Q8N7B9 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.57■□□□□ 0.72
EFCAB3Q8N7B9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
EFCAB3Q8N7B9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EFCAB3Q8N7B9 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
EFCAB3Q8N7B9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.57■□□□□ 0.72
EFCAB3Q8N7B9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
EFCAB3Q8N7B9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EFCAB3Q8N7B9 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EFCAB3Q8N7B9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EFCAB3Q8N7B9 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EFCAB3Q8N7B9 AC011484.1-201ENST00000377652 1995 ntBASIC19.57■□□□□ 0.72
EFCAB3Q8N7B9 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
EFCAB3Q8N7B9 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EFCAB3Q8N7B9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
EFCAB3Q8N7B9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
EFCAB3Q8N7B9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
EFCAB3Q8N7B9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
EFCAB3Q8N7B9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
EFCAB3Q8N7B9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EFCAB3Q8N7B9 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EFCAB3Q8N7B9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
EFCAB3Q8N7B9 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EFCAB3Q8N7B9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.56■□□□□ 0.72
EFCAB3Q8N7B9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
EFCAB3Q8N7B9 TNXA-203ENST00000507684 2038 ntBASIC19.56■□□□□ 0.72
EFCAB3Q8N7B9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EFCAB3Q8N7B9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EFCAB3Q8N7B9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.56■□□□□ 0.72
EFCAB3Q8N7B9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.56■□□□□ 0.72
EFCAB3Q8N7B9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
EFCAB3Q8N7B9 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
EFCAB3Q8N7B9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
EFCAB3Q8N7B9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
EFCAB3Q8N7B9 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
EFCAB3Q8N7B9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
EFCAB3Q8N7B9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EFCAB3Q8N7B9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
EFCAB3Q8N7B9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.55■□□□□ 0.72
EFCAB3Q8N7B9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EFCAB3Q8N7B9 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
EFCAB3Q8N7B9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
EFCAB3Q8N7B9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EFCAB3Q8N7B9 AC091799.1-201ENST00000422823 811 ntBASIC19.55■□□□□ 0.72
EFCAB3Q8N7B9 TERF1P5-201ENST00000477545 1207 ntBASIC19.55■□□□□ 0.72
EFCAB3Q8N7B9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.55■□□□□ 0.72
EFCAB3Q8N7B9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.55■□□□□ 0.72
EFCAB3Q8N7B9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.55■□□□□ 0.72
EFCAB3Q8N7B9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.55■□□□□ 0.72
EFCAB3Q8N7B9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
EFCAB3Q8N7B9 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EFCAB3Q8N7B9 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.55■□□□□ 0.72
EFCAB3Q8N7B9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
EFCAB3Q8N7B9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
EFCAB3Q8N7B9 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.55■□□□□ 0.72
EFCAB3Q8N7B9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EFCAB3Q8N7B9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
EFCAB3Q8N7B9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
EFCAB3Q8N7B9 AC116050.2-201ENST00000612102 1779 ntBASIC19.55■□□□□ 0.72
EFCAB3Q8N7B9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
EFCAB3Q8N7B9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EFCAB3Q8N7B9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EFCAB3Q8N7B9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
EFCAB3Q8N7B9 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EFCAB3Q8N7B9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EFCAB3Q8N7B9 AIRN-201ENST00000601203 4374 ntBASIC19.54■□□□□ 0.72
EFCAB3Q8N7B9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
EFCAB3Q8N7B9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
EFCAB3Q8N7B9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
EFCAB3Q8N7B9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EFCAB3Q8N7B9 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EFCAB3Q8N7B9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
EFCAB3Q8N7B9 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC19.54■□□□□ 0.72
EFCAB3Q8N7B9 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
EFCAB3Q8N7B9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms