Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 C2orf69P3-201ENST00000565542 1120 ntBASIC20.16■□□□□ 0.82
SYNPOQ8N3V7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.16■□□□□ 0.82
SYNPOQ8N3V7 AL445675.2-201ENST00000620291 557 ntBASIC20.16■□□□□ 0.82
SYNPOQ8N3V7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.16■□□□□ 0.82
SYNPOQ8N3V7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPOQ8N3V7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPOQ8N3V7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.16■□□□□ 0.82
SYNPOQ8N3V7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPOQ8N3V7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPOQ8N3V7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SYNPOQ8N3V7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.15■□□□□ 0.82
SYNPOQ8N3V7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNPOQ8N3V7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SYNPOQ8N3V7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNPOQ8N3V7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNPOQ8N3V7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.15■□□□□ 0.82
SYNPOQ8N3V7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
SYNPOQ8N3V7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.15■□□□□ 0.82
SYNPOQ8N3V7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.15■□□□□ 0.82
SYNPOQ8N3V7 AP005242.2-201ENST00000580065 1175 ntBASIC20.15■□□□□ 0.82
SYNPOQ8N3V7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
SYNPOQ8N3V7 DGCR10-201ENST00000609839 495 ntBASIC20.15■□□□□ 0.82
SYNPOQ8N3V7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNPOQ8N3V7 AC121338.2-201ENST00000622535 1744 ntBASIC20.15■□□□□ 0.82
SYNPOQ8N3V7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.15■□□□□ 0.82
SYNPOQ8N3V7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNPOQ8N3V7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNPOQ8N3V7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.15■□□□□ 0.82
SYNPOQ8N3V7 FEM1AP4-201ENST00000443167 1987 ntBASIC20.15■□□□□ 0.82
SYNPOQ8N3V7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNPOQ8N3V7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNPOQ8N3V7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SYNPOQ8N3V7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNPOQ8N3V7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNPOQ8N3V7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
SYNPOQ8N3V7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SYNPOQ8N3V7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.14■□□□□ 0.81
SYNPOQ8N3V7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SYNPOQ8N3V7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.14■□□□□ 0.81
SYNPOQ8N3V7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SYNPOQ8N3V7 KRT8P17-201ENST00000453110 1448 ntBASIC20.14■□□□□ 0.81
SYNPOQ8N3V7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.14■□□□□ 0.81
SYNPOQ8N3V7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.14■□□□□ 0.81
SYNPOQ8N3V7 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.14■□□□□ 0.81
SYNPOQ8N3V7 DUX4L26-201ENST00000489078 1255 ntBASIC20.14■□□□□ 0.81
SYNPOQ8N3V7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.14■□□□□ 0.81
SYNPOQ8N3V7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SYNPOQ8N3V7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.14■□□□□ 0.81
SYNPOQ8N3V7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SYNPOQ8N3V7 C1QL1P1-201ENST00000568105 661 ntBASIC20.14■□□□□ 0.81
SYNPOQ8N3V7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYNPOQ8N3V7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYNPOQ8N3V7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SYNPOQ8N3V7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
SYNPOQ8N3V7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYNPOQ8N3V7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYNPOQ8N3V7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SYNPOQ8N3V7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.13■□□□□ 0.81
SYNPOQ8N3V7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SYNPOQ8N3V7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.13■□□□□ 0.81
SYNPOQ8N3V7 EGLN1P1-201ENST00000531623 762 ntBASIC20.13■□□□□ 0.81
SYNPOQ8N3V7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.13■□□□□ 0.81
SYNPOQ8N3V7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SYNPOQ8N3V7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYNPOQ8N3V7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYNPOQ8N3V7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYNPOQ8N3V7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.13■□□□□ 0.81
SYNPOQ8N3V7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYNPOQ8N3V7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SYNPOQ8N3V7 AP006587.1-201ENST00000534129 1502 ntBASIC20.12■□□□□ 0.81
SYNPOQ8N3V7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
SYNPOQ8N3V7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SYNPOQ8N3V7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SYNPOQ8N3V7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SYNPOQ8N3V7 LIN28AP1-201ENST00000429574 405 ntBASIC20.12■□□□□ 0.81
SYNPOQ8N3V7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.12■□□□□ 0.81
SYNPOQ8N3V7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.12■□□□□ 0.81
SYNPOQ8N3V7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
SYNPOQ8N3V7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.12■□□□□ 0.81
SYNPOQ8N3V7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.12■□□□□ 0.81
SYNPOQ8N3V7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
SYNPOQ8N3V7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.12■□□□□ 0.81
SYNPOQ8N3V7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.12■□□□□ 0.81
SYNPOQ8N3V7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.12■□□□□ 0.81
SYNPOQ8N3V7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SYNPOQ8N3V7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
SYNPOQ8N3V7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SYNPOQ8N3V7 TSPY14P-201ENST00000303979 915 ntBASIC20.11■□□□□ 0.81
SYNPOQ8N3V7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SYNPOQ8N3V7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SYNPOQ8N3V7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SYNPOQ8N3V7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.11■□□□□ 0.81
SYNPOQ8N3V7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SYNPOQ8N3V7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.11■□□□□ 0.81
SYNPOQ8N3V7 AC104076.2-201ENST00000448912 469 ntBASIC20.11■□□□□ 0.81
SYNPOQ8N3V7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SYNPOQ8N3V7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.11■□□□□ 0.81
SYNPOQ8N3V7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.11■□□□□ 0.81
SYNPOQ8N3V7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SYNPOQ8N3V7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms