Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC60Q8IWA6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC22.06■■□□□ 1.12
CCDC60Q8IWA6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC22.06■■□□□ 1.12
CCDC60Q8IWA6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC22.06■■□□□ 1.12
CCDC60Q8IWA6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC22.06■■□□□ 1.12
CCDC60Q8IWA6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC22.06■■□□□ 1.12
CCDC60Q8IWA6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC60Q8IWA6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
CCDC60Q8IWA6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC60Q8IWA6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.06■■□□□ 1.12
CCDC60Q8IWA6 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC60Q8IWA6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
CCDC60Q8IWA6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC22.06■■□□□ 1.12
CCDC60Q8IWA6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC60Q8IWA6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC60Q8IWA6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
CCDC60Q8IWA6 AL157384.1-201ENST00000445995 2473 ntBASIC22.05■■□□□ 1.12
CCDC60Q8IWA6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.05■■□□□ 1.12
CCDC60Q8IWA6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC22.05■■□□□ 1.12
CCDC60Q8IWA6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC22.05■■□□□ 1.12
CCDC60Q8IWA6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.05■■□□□ 1.12
CCDC60Q8IWA6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC22.05■■□□□ 1.12
CCDC60Q8IWA6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC60Q8IWA6 AL353807.1-201ENST00000427475 662 ntBASIC22.05■■□□□ 1.12
CCDC60Q8IWA6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC22.05■■□□□ 1.12
CCDC60Q8IWA6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.05■■□□□ 1.12
CCDC60Q8IWA6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC60Q8IWA6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC60Q8IWA6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
CCDC60Q8IWA6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC22.05■■□□□ 1.12
CCDC60Q8IWA6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC60Q8IWA6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC60Q8IWA6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC60Q8IWA6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
CCDC60Q8IWA6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC60Q8IWA6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC60Q8IWA6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC60Q8IWA6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
CCDC60Q8IWA6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC60Q8IWA6 TSPY15P-201ENST00000457163 923 ntBASIC22.04■■□□□ 1.12
CCDC60Q8IWA6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC22.04■■□□□ 1.12
CCDC60Q8IWA6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC22.04■■□□□ 1.12
CCDC60Q8IWA6 CD177P1-201ENST00000606252 935 ntBASIC22.04■■□□□ 1.12
CCDC60Q8IWA6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
CCDC60Q8IWA6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC22.04■■□□□ 1.12
CCDC60Q8IWA6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC60Q8IWA6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC60Q8IWA6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC60Q8IWA6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC60Q8IWA6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC60Q8IWA6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC22.04■■□□□ 1.12
CCDC60Q8IWA6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC60Q8IWA6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC60Q8IWA6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC60Q8IWA6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC60Q8IWA6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.03■■□□□ 1.12
CCDC60Q8IWA6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC60Q8IWA6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC60Q8IWA6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
CCDC60Q8IWA6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC60Q8IWA6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC22.03■■□□□ 1.12
CCDC60Q8IWA6 FAM197Y1-201ENST00000421178 764 ntBASIC22.03■■□□□ 1.12
CCDC60Q8IWA6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC60Q8IWA6 YBX1P10-201ENST00000444752 975 ntBASIC22.03■■□□□ 1.12
CCDC60Q8IWA6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22.03■■□□□ 1.12
CCDC60Q8IWA6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
CCDC60Q8IWA6 MIR4785-201ENST00000585005 73 ntBASIC22.03■■□□□ 1.12
CCDC60Q8IWA6 AL353708.3-201ENST00000610272 989 ntBASIC22.03■■□□□ 1.12
CCDC60Q8IWA6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
CCDC60Q8IWA6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC60Q8IWA6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC60Q8IWA6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC60Q8IWA6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC60Q8IWA6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC22.03■■□□□ 1.12
CCDC60Q8IWA6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.03■■□□□ 1.12
CCDC60Q8IWA6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC22.03■■□□□ 1.12
CCDC60Q8IWA6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC60Q8IWA6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC60Q8IWA6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.02■■□□□ 1.12
CCDC60Q8IWA6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC60Q8IWA6 GOLGA6L3-201ENST00000507199 1679 ntBASIC22.02■■□□□ 1.12
CCDC60Q8IWA6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC60Q8IWA6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC60Q8IWA6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC60Q8IWA6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC22.02■■□□□ 1.12
CCDC60Q8IWA6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC60Q8IWA6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC22.02■■□□□ 1.12
CCDC60Q8IWA6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC60Q8IWA6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC60Q8IWA6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC60Q8IWA6 AL691432.2-201ENST00000607222 2038 ntBASIC22.02■■□□□ 1.12
CCDC60Q8IWA6 KRT17P2-201ENST00000300992 1314 ntBASIC22.02■■□□□ 1.12
CCDC60Q8IWA6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.02■■□□□ 1.11
CCDC60Q8IWA6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.02■■□□□ 1.11
CCDC60Q8IWA6 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC22.01■■□□□ 1.11
CCDC60Q8IWA6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCDC60Q8IWA6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC22.01■■□□□ 1.11
CCDC60Q8IWA6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCDC60Q8IWA6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.01■■□□□ 1.11
CCDC60Q8IWA6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms