Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
APLFQ8IW19 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
APLFQ8IW19 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
APLFQ8IW19 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.55■□□□□ 0.72
APLFQ8IW19 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APLFQ8IW19 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
APLFQ8IW19 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APLFQ8IW19 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.55■□□□□ 0.72
APLFQ8IW19 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APLFQ8IW19 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APLFQ8IW19 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
APLFQ8IW19 RARRES2P4-201ENST00000514074 484 ntBASIC19.55■□□□□ 0.72
APLFQ8IW19 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.55■□□□□ 0.72
APLFQ8IW19 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.55■□□□□ 0.72
APLFQ8IW19 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.55■□□□□ 0.72
APLFQ8IW19 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
APLFQ8IW19 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.55■□□□□ 0.72
APLFQ8IW19 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.55■□□□□ 0.72
APLFQ8IW19 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
APLFQ8IW19 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
APLFQ8IW19 RBM17P2-201ENST00000616397 1405 ntBASIC19.55■□□□□ 0.72
APLFQ8IW19 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
APLFQ8IW19 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
APLFQ8IW19 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.55■□□□□ 0.72
APLFQ8IW19 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
APLFQ8IW19 AC020907.5-201ENST00000624372 1936 ntBASIC19.55■□□□□ 0.72
APLFQ8IW19 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
APLFQ8IW19 AL032819.2-201ENST00000624543 2162 ntBASIC19.54■□□□□ 0.72
APLFQ8IW19 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
APLFQ8IW19 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
APLFQ8IW19 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
APLFQ8IW19 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
APLFQ8IW19 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APLFQ8IW19 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
APLFQ8IW19 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APLFQ8IW19 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
APLFQ8IW19 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
APLFQ8IW19 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
APLFQ8IW19 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
APLFQ8IW19 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.54■□□□□ 0.72
APLFQ8IW19 AC091874.3-201ENST00000512672 1195 ntBASIC19.54■□□□□ 0.72
APLFQ8IW19 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.54■□□□□ 0.72
APLFQ8IW19 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APLFQ8IW19 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
APLFQ8IW19 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
APLFQ8IW19 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.54■□□□□ 0.72
APLFQ8IW19 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.54■□□□□ 0.72
APLFQ8IW19 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.54■□□□□ 0.72
APLFQ8IW19 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
APLFQ8IW19 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
APLFQ8IW19 NOC2LP1-202ENST00000452600 2235 ntBASIC19.53■□□□□ 0.72
APLFQ8IW19 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
APLFQ8IW19 AC010980.2-201ENST00000587099 1412 ntBASIC19.53■□□□□ 0.72
APLFQ8IW19 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APLFQ8IW19 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
APLFQ8IW19 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.53■□□□□ 0.72
APLFQ8IW19 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.53■□□□□ 0.72
APLFQ8IW19 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.53■□□□□ 0.72
APLFQ8IW19 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.53■□□□□ 0.72
APLFQ8IW19 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.53■□□□□ 0.72
APLFQ8IW19 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APLFQ8IW19 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
APLFQ8IW19 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
APLFQ8IW19 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
APLFQ8IW19 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APLFQ8IW19 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.53■□□□□ 0.72
APLFQ8IW19 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
APLFQ8IW19 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APLFQ8IW19 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.53■□□□□ 0.72
APLFQ8IW19 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
APLFQ8IW19 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
APLFQ8IW19 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
APLFQ8IW19 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
APLFQ8IW19 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
APLFQ8IW19 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
APLFQ8IW19 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
APLFQ8IW19 AL162377.1-201ENST00000618844 1793 ntBASIC19.52■□□□□ 0.72
APLFQ8IW19 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
APLFQ8IW19 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
APLFQ8IW19 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
APLFQ8IW19 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
APLFQ8IW19 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
APLFQ8IW19 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.52■□□□□ 0.72
APLFQ8IW19 ESRRAP1-201ENST00000400596 1257 ntBASIC19.52■□□□□ 0.72
APLFQ8IW19 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.52■□□□□ 0.72
APLFQ8IW19 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.52■□□□□ 0.72
APLFQ8IW19 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
APLFQ8IW19 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
APLFQ8IW19 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
APLFQ8IW19 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.52■□□□□ 0.72
APLFQ8IW19 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
APLFQ8IW19 LTB4R2-202ENST00000528054 3092 ntBASIC19.52■□□□□ 0.71
APLFQ8IW19 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
APLFQ8IW19 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
APLFQ8IW19 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
APLFQ8IW19 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
APLFQ8IW19 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
APLFQ8IW19 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
APLFQ8IW19 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.51■□□□□ 0.71
APLFQ8IW19 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms