Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.76■□□□□ 0.75
LDB1Q86U70 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LDB1Q86U70 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.76■□□□□ 0.75
LDB1Q86U70 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.76■□□□□ 0.75
LDB1Q86U70 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.76■□□□□ 0.75
LDB1Q86U70 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.76■□□□□ 0.75
LDB1Q86U70 AC083880.1-201ENST00000608266 535 ntBASIC19.76■□□□□ 0.75
LDB1Q86U70 AC006557.6-201ENST00000623071 864 ntBASIC19.76■□□□□ 0.75
LDB1Q86U70 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LDB1Q86U70 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LDB1Q86U70 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LDB1Q86U70 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LDB1Q86U70 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LDB1Q86U70 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LDB1Q86U70 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LDB1Q86U70 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LDB1Q86U70 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LDB1Q86U70 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LDB1Q86U70 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LDB1Q86U70 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LDB1Q86U70 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LDB1Q86U70 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.75■□□□□ 0.75
LDB1Q86U70 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.75■□□□□ 0.75
LDB1Q86U70 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LDB1Q86U70 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.75■□□□□ 0.75
LDB1Q86U70 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.75■□□□□ 0.75
LDB1Q86U70 AC097658.1-201ENST00000475555 843 ntBASIC19.75■□□□□ 0.75
LDB1Q86U70 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.75■□□□□ 0.75
LDB1Q86U70 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
LDB1Q86U70 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
LDB1Q86U70 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.75■□□□□ 0.75
LDB1Q86U70 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LDB1Q86U70 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LDB1Q86U70 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LDB1Q86U70 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LDB1Q86U70 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
LDB1Q86U70 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LDB1Q86U70 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.75■□□□□ 0.75
LDB1Q86U70 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LDB1Q86U70 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LDB1Q86U70 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LDB1Q86U70 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LDB1Q86U70 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
LDB1Q86U70 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
LDB1Q86U70 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LDB1Q86U70 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LDB1Q86U70 PHGDH-210ENST00000641115 1638 ntBASIC19.74■□□□□ 0.75
LDB1Q86U70 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
LDB1Q86U70 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LDB1Q86U70 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LDB1Q86U70 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LDB1Q86U70 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
LDB1Q86U70 AL355802.2-201ENST00000402069 882 ntBASIC19.74■□□□□ 0.75
LDB1Q86U70 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.74■□□□□ 0.75
LDB1Q86U70 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LDB1Q86U70 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LDB1Q86U70 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.74■□□□□ 0.75
LDB1Q86U70 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.74■□□□□ 0.75
LDB1Q86U70 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.74■□□□□ 0.75
LDB1Q86U70 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.74■□□□□ 0.75
LDB1Q86U70 AC124283.5-201ENST00000624661 1809 ntBASIC19.74■□□□□ 0.75
LDB1Q86U70 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
LDB1Q86U70 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDB1Q86U70 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LDB1Q86U70 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
LDB1Q86U70 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDB1Q86U70 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.73■□□□□ 0.75
LDB1Q86U70 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.73■□□□□ 0.75
LDB1Q86U70 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDB1Q86U70 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.73■□□□□ 0.75
LDB1Q86U70 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDB1Q86U70 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDB1Q86U70 AC009237.14-201ENST00000609975 1594 ntBASIC19.73■□□□□ 0.75
LDB1Q86U70 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDB1Q86U70 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDB1Q86U70 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDB1Q86U70 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.73■□□□□ 0.75
LDB1Q86U70 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LDB1Q86U70 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDB1Q86U70 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDB1Q86U70 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDB1Q86U70 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDB1Q86U70 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDB1Q86U70 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDB1Q86U70 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
LDB1Q86U70 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LDB1Q86U70 AC069152.1-201ENST00000438030 544 ntBASIC19.72■□□□□ 0.75
LDB1Q86U70 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LDB1Q86U70 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.72■□□□□ 0.75
LDB1Q86U70 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LDB1Q86U70 AC142086.2-201ENST00000569753 217 ntBASIC19.72■□□□□ 0.75
LDB1Q86U70 AC005829.2-201ENST00000571422 1056 ntBASIC19.72■□□□□ 0.75
LDB1Q86U70 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
LDB1Q86U70 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.72■□□□□ 0.75
LDB1Q86U70 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDB1Q86U70 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LDB1Q86U70 TREX1-205ENST00000625293 1783 ntBASIC19.72■□□□□ 0.75
LDB1Q86U70 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
LDB1Q86U70 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDB1Q86U70 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms