Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 RBM17P2-201ENST00000616397 1405 ntBASIC18.21■□□□□ 0.51
TUBA1AQ71U36 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TUBA1AQ71U36 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
TUBA1AQ71U36 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.2■□□□□ 0.5
TUBA1AQ71U36 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.2■□□□□ 0.5
TUBA1AQ71U36 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TUBA1AQ71U36 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBA1AQ71U36 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.2■□□□□ 0.5
TUBA1AQ71U36 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TUBA1AQ71U36 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBA1AQ71U36 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.2■□□□□ 0.5
TUBA1AQ71U36 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TUBA1AQ71U36 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.2■□□□□ 0.5
TUBA1AQ71U36 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.2■□□□□ 0.5
TUBA1AQ71U36 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TUBA1AQ71U36 CNN2P6-201ENST00000439038 900 ntBASIC18.2■□□□□ 0.5
TUBA1AQ71U36 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
TUBA1AQ71U36 AC245052.3-201ENST00000450182 901 ntBASIC18.2■□□□□ 0.5
TUBA1AQ71U36 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.2■□□□□ 0.5
TUBA1AQ71U36 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.2■□□□□ 0.5
TUBA1AQ71U36 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBA1AQ71U36 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBA1AQ71U36 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBA1AQ71U36 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.2■□□□□ 0.5
TUBA1AQ71U36 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBA1AQ71U36 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 MIR663A-201ENST00000385250 93 ntBASIC18.19■□□□□ 0.5
TUBA1AQ71U36 AC007322.1-201ENST00000426983 750 ntBASIC18.19■□□□□ 0.5
TUBA1AQ71U36 AC026185.1-201ENST00000445748 174 ntBASIC18.19■□□□□ 0.5
TUBA1AQ71U36 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 RAP2CP1-201ENST00000605103 478 ntBASIC18.19■□□□□ 0.5
TUBA1AQ71U36 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.19■□□□□ 0.5
TUBA1AQ71U36 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.18■□□□□ 0.5
TUBA1AQ71U36 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBA1AQ71U36 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TUBA1AQ71U36 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBA1AQ71U36 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBA1AQ71U36 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBA1AQ71U36 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBA1AQ71U36 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBA1AQ71U36 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBA1AQ71U36 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBA1AQ71U36 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBA1AQ71U36 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.18■□□□□ 0.5
TUBA1AQ71U36 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TUBA1AQ71U36 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.18■□□□□ 0.5
TUBA1AQ71U36 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TUBA1AQ71U36 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.18■□□□□ 0.5
TUBA1AQ71U36 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBA1AQ71U36 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TUBA1AQ71U36 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
TUBA1AQ71U36 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBA1AQ71U36 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBA1AQ71U36 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TUBA1AQ71U36 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TUBA1AQ71U36 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TUBA1AQ71U36 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms