Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.08■□□□□ 0.32
COLCA1Q6ZS62 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.08■□□□□ 0.32
COLCA1Q6ZS62 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.08■□□□□ 0.32
COLCA1Q6ZS62 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.08■□□□□ 0.32
COLCA1Q6ZS62 AC120498.8-201ENST00000614275 531 ntBASIC17.08■□□□□ 0.32
COLCA1Q6ZS62 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
COLCA1Q6ZS62 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.08■□□□□ 0.32
COLCA1Q6ZS62 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
COLCA1Q6ZS62 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COLCA1Q6ZS62 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.08■□□□□ 0.32
COLCA1Q6ZS62 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
COLCA1Q6ZS62 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COLCA1Q6ZS62 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.07■□□□□ 0.32
COLCA1Q6ZS62 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.07■□□□□ 0.32
COLCA1Q6ZS62 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COLCA1Q6ZS62 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COLCA1Q6ZS62 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COLCA1Q6ZS62 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
COLCA1Q6ZS62 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.07■□□□□ 0.32
COLCA1Q6ZS62 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.07■□□□□ 0.32
COLCA1Q6ZS62 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.07■□□□□ 0.32
COLCA1Q6ZS62 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COLCA1Q6ZS62 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
COLCA1Q6ZS62 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.07■□□□□ 0.32
COLCA1Q6ZS62 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COLCA1Q6ZS62 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.07■□□□□ 0.32
COLCA1Q6ZS62 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.07■□□□□ 0.32
COLCA1Q6ZS62 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.07■□□□□ 0.32
COLCA1Q6ZS62 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.07■□□□□ 0.32
COLCA1Q6ZS62 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.07■□□□□ 0.32
COLCA1Q6ZS62 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
COLCA1Q6ZS62 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.07■□□□□ 0.32
COLCA1Q6ZS62 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COLCA1Q6ZS62 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.07■□□□□ 0.32
COLCA1Q6ZS62 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
COLCA1Q6ZS62 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COLCA1Q6ZS62 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COLCA1Q6ZS62 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
COLCA1Q6ZS62 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
COLCA1Q6ZS62 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
COLCA1Q6ZS62 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.06■□□□□ 0.32
COLCA1Q6ZS62 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.06■□□□□ 0.32
COLCA1Q6ZS62 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COLCA1Q6ZS62 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COLCA1Q6ZS62 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
COLCA1Q6ZS62 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COLCA1Q6ZS62 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COLCA1Q6ZS62 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COLCA1Q6ZS62 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.06■□□□□ 0.32
COLCA1Q6ZS62 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
COLCA1Q6ZS62 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COLCA1Q6ZS62 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COLCA1Q6ZS62 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COLCA1Q6ZS62 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.06■□□□□ 0.32
COLCA1Q6ZS62 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COLCA1Q6ZS62 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.06■□□□□ 0.32
COLCA1Q6ZS62 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.06■□□□□ 0.32
COLCA1Q6ZS62 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.06■□□□□ 0.32
COLCA1Q6ZS62 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COLCA1Q6ZS62 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
COLCA1Q6ZS62 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.05■□□□□ 0.32
COLCA1Q6ZS62 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
COLCA1Q6ZS62 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COLCA1Q6ZS62 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.05■□□□□ 0.32
COLCA1Q6ZS62 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.05■□□□□ 0.32
COLCA1Q6ZS62 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COLCA1Q6ZS62 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.05■□□□□ 0.32
COLCA1Q6ZS62 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
COLCA1Q6ZS62 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.05■□□□□ 0.32
COLCA1Q6ZS62 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.05■□□□□ 0.32
COLCA1Q6ZS62 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.05■□□□□ 0.32
COLCA1Q6ZS62 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.05■□□□□ 0.32
COLCA1Q6ZS62 UNC93B4-201ENST00000505679 747 ntBASIC17.05■□□□□ 0.32
COLCA1Q6ZS62 UNC93B5-201ENST00000530315 699 ntBASIC17.05■□□□□ 0.32
COLCA1Q6ZS62 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COLCA1Q6ZS62 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.05■□□□□ 0.32
COLCA1Q6ZS62 SOX15-203ENST00000570788 1093 ntBASIC17.05■□□□□ 0.32
COLCA1Q6ZS62 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
COLCA1Q6ZS62 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COLCA1Q6ZS62 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
COLCA1Q6ZS62 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.05■□□□□ 0.32
COLCA1Q6ZS62 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.05■□□□□ 0.32
COLCA1Q6ZS62 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COLCA1Q6ZS62 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
COLCA1Q6ZS62 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
COLCA1Q6ZS62 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COLCA1Q6ZS62 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COLCA1Q6ZS62 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COLCA1Q6ZS62 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COLCA1Q6ZS62 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COLCA1Q6ZS62 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COLCA1Q6ZS62 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COLCA1Q6ZS62 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COLCA1Q6ZS62 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.04■□□□□ 0.32
COLCA1Q6ZS62 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.04■□□□□ 0.32
COLCA1Q6ZS62 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
COLCA1Q6ZS62 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
COLCA1Q6ZS62 AC008687.6-201ENST00000596318 630 ntBASIC17.04■□□□□ 0.32
COLCA1Q6ZS62 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
COLCA1Q6ZS62 AC124283.5-201ENST00000624661 1809 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms