Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AL359736.2-201ENST00000621992 437 ntBASIC20.64■□□□□ 0.89
RFWD3Q6PCD5 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.64■□□□□ 0.89
RFWD3Q6PCD5 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFWD3Q6PCD5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.64■□□□□ 0.89
RFWD3Q6PCD5 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFWD3Q6PCD5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.64■□□□□ 0.89
RFWD3Q6PCD5 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFWD3Q6PCD5 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFWD3Q6PCD5 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFWD3Q6PCD5 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.63■□□□□ 0.89
RFWD3Q6PCD5 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFWD3Q6PCD5 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.63■□□□□ 0.89
RFWD3Q6PCD5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.63■□□□□ 0.89
RFWD3Q6PCD5 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.63■□□□□ 0.89
RFWD3Q6PCD5 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFWD3Q6PCD5 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFWD3Q6PCD5 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.63■□□□□ 0.89
RFWD3Q6PCD5 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.63■□□□□ 0.89
RFWD3Q6PCD5 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.63■□□□□ 0.89
RFWD3Q6PCD5 RPPH1-201ENST00000516869 333 ntBASIC20.63■□□□□ 0.89
RFWD3Q6PCD5 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFWD3Q6PCD5 MTDHP1-201ENST00000605323 784 ntBASIC20.63■□□□□ 0.89
RFWD3Q6PCD5 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
RFWD3Q6PCD5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
RFWD3Q6PCD5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFWD3Q6PCD5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFWD3Q6PCD5 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.63■□□□□ 0.89
RFWD3Q6PCD5 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.63■□□□□ 0.89
RFWD3Q6PCD5 AC020907.5-201ENST00000624372 1936 ntBASIC20.63■□□□□ 0.89
RFWD3Q6PCD5 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFWD3Q6PCD5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFWD3Q6PCD5 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFWD3Q6PCD5 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFWD3Q6PCD5 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFWD3Q6PCD5 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.62■□□□□ 0.89
RFWD3Q6PCD5 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
RFWD3Q6PCD5 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.62■□□□□ 0.89
RFWD3Q6PCD5 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.62■□□□□ 0.89
RFWD3Q6PCD5 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.62■□□□□ 0.89
RFWD3Q6PCD5 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.62■□□□□ 0.89
RFWD3Q6PCD5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFWD3Q6PCD5 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFWD3Q6PCD5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFWD3Q6PCD5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.62■□□□□ 0.89
RFWD3Q6PCD5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFWD3Q6PCD5 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFWD3Q6PCD5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFWD3Q6PCD5 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFWD3Q6PCD5 AC087289.5-201ENST00000586076 3175 ntBASIC20.61■□□□□ 0.89
RFWD3Q6PCD5 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.61■□□□□ 0.89
RFWD3Q6PCD5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.61■□□□□ 0.89
RFWD3Q6PCD5 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RFWD3Q6PCD5 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFWD3Q6PCD5 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.61■□□□□ 0.89
RFWD3Q6PCD5 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFWD3Q6PCD5 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.61■□□□□ 0.89
RFWD3Q6PCD5 AL023875.1-201ENST00000640777 796 ntBASIC20.61■□□□□ 0.89
RFWD3Q6PCD5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.61■□□□□ 0.89
RFWD3Q6PCD5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFWD3Q6PCD5 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFWD3Q6PCD5 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFWD3Q6PCD5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFWD3Q6PCD5 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
RFWD3Q6PCD5 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.6■□□□□ 0.89
RFWD3Q6PCD5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFWD3Q6PCD5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFWD3Q6PCD5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFWD3Q6PCD5 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFWD3Q6PCD5 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFWD3Q6PCD5 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFWD3Q6PCD5 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.6■□□□□ 0.89
RFWD3Q6PCD5 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.6■□□□□ 0.89
RFWD3Q6PCD5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.6■□□□□ 0.89
RFWD3Q6PCD5 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.6■□□□□ 0.89
RFWD3Q6PCD5 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFWD3Q6PCD5 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
RFWD3Q6PCD5 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.6■□□□□ 0.89
RFWD3Q6PCD5 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 FAM197Y4-202ENST00000622692 608 ntBASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.59■□□□□ 0.89
RFWD3Q6PCD5 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms