Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF544Q6NX49 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF544Q6NX49 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF544Q6NX49 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF544Q6NX49 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF544Q6NX49 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZNF544Q6NX49 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF544Q6NX49 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.13■□□□□ 0.49
ZNF544Q6NX49 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ZNF544Q6NX49 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.13■□□□□ 0.49
ZNF544Q6NX49 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.13■□□□□ 0.49
ZNF544Q6NX49 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.13■□□□□ 0.49
ZNF544Q6NX49 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.13■□□□□ 0.49
ZNF544Q6NX49 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF544Q6NX49 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF544Q6NX49 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF544Q6NX49 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF544Q6NX49 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF544Q6NX49 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ZNF544Q6NX49 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ZNF544Q6NX49 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF544Q6NX49 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
ZNF544Q6NX49 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ZNF544Q6NX49 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF544Q6NX49 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF544Q6NX49 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF544Q6NX49 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF544Q6NX49 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF544Q6NX49 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF544Q6NX49 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.12■□□□□ 0.49
ZNF544Q6NX49 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF544Q6NX49 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF544Q6NX49 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF544Q6NX49 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF544Q6NX49 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF544Q6NX49 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF544Q6NX49 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF544Q6NX49 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF544Q6NX49 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF544Q6NX49 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF544Q6NX49 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ZNF544Q6NX49 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF544Q6NX49 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.12■□□□□ 0.49
ZNF544Q6NX49 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF544Q6NX49 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF544Q6NX49 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF544Q6NX49 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.11■□□□□ 0.49
ZNF544Q6NX49 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF544Q6NX49 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF544Q6NX49 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
ZNF544Q6NX49 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF544Q6NX49 TERF1P5-201ENST00000477545 1207 ntBASIC18.11■□□□□ 0.49
ZNF544Q6NX49 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF544Q6NX49 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.11■□□□□ 0.49
ZNF544Q6NX49 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ZNF544Q6NX49 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.11■□□□□ 0.49
ZNF544Q6NX49 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF544Q6NX49 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF544Q6NX49 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
ZNF544Q6NX49 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
ZNF544Q6NX49 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF544Q6NX49 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF544Q6NX49 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.11■□□□□ 0.49
ZNF544Q6NX49 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
ZNF544Q6NX49 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
ZNF544Q6NX49 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ZNF544Q6NX49 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ZNF544Q6NX49 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.1■□□□□ 0.49
ZNF544Q6NX49 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
ZNF544Q6NX49 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF544Q6NX49 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.1■□□□□ 0.49
ZNF544Q6NX49 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF544Q6NX49 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF544Q6NX49 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.1■□□□□ 0.49
ZNF544Q6NX49 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.1■□□□□ 0.49
ZNF544Q6NX49 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF544Q6NX49 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF544Q6NX49 CNN2P6-201ENST00000439038 900 ntBASIC18.1■□□□□ 0.49
ZNF544Q6NX49 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.1■□□□□ 0.49
ZNF544Q6NX49 AC007322.4-201ENST00000509611 723 ntBASIC18.1■□□□□ 0.49
ZNF544Q6NX49 AC083906.2-201ENST00000511578 360 ntBASIC18.1■□□□□ 0.49
ZNF544Q6NX49 SLC7A5P2-201ENST00000553010 536 ntBASIC18.1■□□□□ 0.49
ZNF544Q6NX49 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF544Q6NX49 AL050303.2-201ENST00000619798 666 ntBASIC18.1■□□□□ 0.49
ZNF544Q6NX49 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.1■□□□□ 0.49
ZNF544Q6NX49 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF544Q6NX49 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF544Q6NX49 AC112907.3-201ENST00000577781 2400 ntBASIC18.1■□□□□ 0.49
ZNF544Q6NX49 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ZNF544Q6NX49 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ZNF544Q6NX49 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF544Q6NX49 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
ZNF544Q6NX49 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
ZNF544Q6NX49 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.1■□□□□ 0.49
ZNF544Q6NX49 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF544Q6NX49 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF544Q6NX49 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF544Q6NX49 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF544Q6NX49 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF544Q6NX49 KRT16P2-201ENST00000414673 1423 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms