Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF43Q68DV7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF43Q68DV7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF43Q68DV7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF43Q68DV7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF43Q68DV7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RNF43Q68DV7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF43Q68DV7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RNF43Q68DV7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.75■□□□□ 0.91
RNF43Q68DV7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RNF43Q68DV7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RNF43Q68DV7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF43Q68DV7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF43Q68DV7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF43Q68DV7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RNF43Q68DV7 AC023632.3-201ENST00000521633 145 ntBASIC20.75■□□□□ 0.91
RNF43Q68DV7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF43Q68DV7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF43Q68DV7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.75■□□□□ 0.91
RNF43Q68DV7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF43Q68DV7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RNF43Q68DV7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF43Q68DV7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF43Q68DV7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF43Q68DV7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RNF43Q68DV7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RNF43Q68DV7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.75■□□□□ 0.91
RNF43Q68DV7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RNF43Q68DV7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF43Q68DV7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF43Q68DV7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF43Q68DV7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF43Q68DV7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF43Q68DV7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF43Q68DV7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF43Q68DV7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF43Q68DV7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF43Q68DV7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF43Q68DV7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.74■□□□□ 0.91
RNF43Q68DV7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF43Q68DV7 RPPH1-201ENST00000516869 333 ntBASIC20.74■□□□□ 0.91
RNF43Q68DV7 C1QBPP2-201ENST00000528754 825 ntBASIC20.74■□□□□ 0.91
RNF43Q68DV7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.74■□□□□ 0.91
RNF43Q68DV7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.74■□□□□ 0.91
RNF43Q68DV7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.74■□□□□ 0.91
RNF43Q68DV7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF43Q68DV7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF43Q68DV7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF43Q68DV7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF43Q68DV7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF43Q68DV7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF43Q68DV7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.74■□□□□ 0.91
RNF43Q68DV7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF43Q68DV7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF43Q68DV7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF43Q68DV7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF43Q68DV7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF43Q68DV7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
RNF43Q68DV7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF43Q68DV7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF43Q68DV7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF43Q68DV7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF43Q68DV7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF43Q68DV7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RNF43Q68DV7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.73■□□□□ 0.91
RNF43Q68DV7 LINC01023-201ENST00000606054 436 ntBASIC20.73■□□□□ 0.91
RNF43Q68DV7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF43Q68DV7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF43Q68DV7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RNF43Q68DV7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF43Q68DV7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF43Q68DV7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF43Q68DV7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF43Q68DV7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.73■□□□□ 0.91
RNF43Q68DV7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF43Q68DV7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF43Q68DV7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF43Q68DV7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF43Q68DV7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF43Q68DV7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF43Q68DV7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF43Q68DV7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RNF43Q68DV7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF43Q68DV7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF43Q68DV7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF43Q68DV7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF43Q68DV7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
RNF43Q68DV7 POM121L13P-201ENST00000422362 380 ntBASIC20.72■□□□□ 0.91
RNF43Q68DV7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF43Q68DV7 SNORA78-201ENST00000459373 127 ntBASIC20.72■□□□□ 0.91
RNF43Q68DV7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF43Q68DV7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF43Q68DV7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF43Q68DV7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF43Q68DV7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
RNF43Q68DV7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RNF43Q68DV7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF43Q68DV7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF43Q68DV7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF43Q68DV7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms