Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD4Q5XG99 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
LYSMD4Q5XG99 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
LYSMD4Q5XG99 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD4Q5XG99 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD4Q5XG99 AC018553.1-201ENST00000616682 1458 ntBASIC19.5■□□□□ 0.71
LYSMD4Q5XG99 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.5■□□□□ 0.71
LYSMD4Q5XG99 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.5■□□□□ 0.71
LYSMD4Q5XG99 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
LYSMD4Q5XG99 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.5■□□□□ 0.71
LYSMD4Q5XG99 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD4Q5XG99 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD4Q5XG99 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.5■□□□□ 0.71
LYSMD4Q5XG99 AP000692.2-201ENST00000608391 879 ntBASIC19.5■□□□□ 0.71
LYSMD4Q5XG99 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
LYSMD4Q5XG99 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD4Q5XG99 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.5■□□□□ 0.71
LYSMD4Q5XG99 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
LYSMD4Q5XG99 DPP3P2-201ENST00000416030 1696 ntBASIC19.49■□□□□ 0.71
LYSMD4Q5XG99 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LYSMD4Q5XG99 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LYSMD4Q5XG99 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.49■□□□□ 0.71
LYSMD4Q5XG99 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.49■□□□□ 0.71
LYSMD4Q5XG99 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.49■□□□□ 0.71
LYSMD4Q5XG99 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
LYSMD4Q5XG99 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.49■□□□□ 0.71
LYSMD4Q5XG99 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
LYSMD4Q5XG99 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.49■□□□□ 0.71
LYSMD4Q5XG99 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.49■□□□□ 0.71
LYSMD4Q5XG99 AC011298.2-201ENST00000617989 482 ntBASIC19.49■□□□□ 0.71
LYSMD4Q5XG99 AC130371.2-201ENST00000619443 611 ntBASIC19.49■□□□□ 0.71
LYSMD4Q5XG99 AL358472.4-201ENST00000633140 710 ntBASIC19.49■□□□□ 0.71
LYSMD4Q5XG99 AC116562.4-202ENST00000641738 218 ntBASIC19.49■□□□□ 0.71
LYSMD4Q5XG99 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LYSMD4Q5XG99 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
LYSMD4Q5XG99 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LYSMD4Q5XG99 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LYSMD4Q5XG99 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LYSMD4Q5XG99 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.49■□□□□ 0.71
LYSMD4Q5XG99 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.49■□□□□ 0.71
LYSMD4Q5XG99 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LYSMD4Q5XG99 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
LYSMD4Q5XG99 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.48■□□□□ 0.71
LYSMD4Q5XG99 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.48■□□□□ 0.71
LYSMD4Q5XG99 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LYSMD4Q5XG99 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LYSMD4Q5XG99 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LYSMD4Q5XG99 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LYSMD4Q5XG99 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LYSMD4Q5XG99 AC117947.1-201ENST00000427448 529 ntBASIC19.48■□□□□ 0.71
LYSMD4Q5XG99 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LYSMD4Q5XG99 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.48■□□□□ 0.71
LYSMD4Q5XG99 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.48■□□□□ 0.71
LYSMD4Q5XG99 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.48■□□□□ 0.71
LYSMD4Q5XG99 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.48■□□□□ 0.71
LYSMD4Q5XG99 AC005229.4-201ENST00000610085 2198 ntBASIC19.48■□□□□ 0.71
LYSMD4Q5XG99 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LYSMD4Q5XG99 RCC2P6-201ENST00000526625 1557 ntBASIC19.48■□□□□ 0.71
LYSMD4Q5XG99 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD4Q5XG99 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD4Q5XG99 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD4Q5XG99 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.47■□□□□ 0.71
LYSMD4Q5XG99 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD4Q5XG99 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD4Q5XG99 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD4Q5XG99 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD4Q5XG99 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD4Q5XG99 CCR12P-201ENST00000446203 998 ntBASIC19.47■□□□□ 0.71
LYSMD4Q5XG99 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.47■□□□□ 0.71
LYSMD4Q5XG99 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.47■□□□□ 0.71
LYSMD4Q5XG99 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.47■□□□□ 0.71
LYSMD4Q5XG99 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.47■□□□□ 0.71
LYSMD4Q5XG99 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.47■□□□□ 0.71
LYSMD4Q5XG99 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.47■□□□□ 0.71
LYSMD4Q5XG99 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD4Q5XG99 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD4Q5XG99 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD4Q5XG99 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
LYSMD4Q5XG99 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LYSMD4Q5XG99 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.46■□□□□ 0.71
LYSMD4Q5XG99 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
LYSMD4Q5XG99 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
LYSMD4Q5XG99 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LYSMD4Q5XG99 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.46■□□□□ 0.71
LYSMD4Q5XG99 AC004951.3-201ENST00000418645 1148 ntBASIC19.46■□□□□ 0.71
LYSMD4Q5XG99 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.46■□□□□ 0.71
LYSMD4Q5XG99 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.46■□□□□ 0.71
LYSMD4Q5XG99 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.46■□□□□ 0.71
LYSMD4Q5XG99 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.46■□□□□ 0.71
LYSMD4Q5XG99 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LYSMD4Q5XG99 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
LYSMD4Q5XG99 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LYSMD4Q5XG99 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.46■□□□□ 0.71
LYSMD4Q5XG99 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.45■□□□□ 0.7
LYSMD4Q5XG99 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD4Q5XG99 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
LYSMD4Q5XG99 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD4Q5XG99 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LYSMD4Q5XG99 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.45■□□□□ 0.7
LYSMD4Q5XG99 PLK5-205ENST00000642079 1969 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms