Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TRIM71Q2Q1W2 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.68■■□□□ 1.06
TRIM71Q2Q1W2 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM71Q2Q1W2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM71Q2Q1W2 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM71Q2Q1W2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM71Q2Q1W2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM71Q2Q1W2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM71Q2Q1W2 AC007225.1-201ENST00000566331 1836 ntBASIC21.67■■□□□ 1.06
TRIM71Q2Q1W2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.67■■□□□ 1.06
TRIM71Q2Q1W2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM71Q2Q1W2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM71Q2Q1W2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM71Q2Q1W2 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.67■■□□□ 1.06
TRIM71Q2Q1W2 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TRIM71Q2Q1W2 TUBB8P6-201ENST00000436895 1288 ntBASIC21.67■■□□□ 1.06
TRIM71Q2Q1W2 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
TRIM71Q2Q1W2 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM71Q2Q1W2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.67■■□□□ 1.06
TRIM71Q2Q1W2 AC006011.2-201ENST00000621313 1158 ntBASIC21.67■■□□□ 1.06
TRIM71Q2Q1W2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM71Q2Q1W2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM71Q2Q1W2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM71Q2Q1W2 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM71Q2Q1W2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TRIM71Q2Q1W2 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM71Q2Q1W2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM71Q2Q1W2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM71Q2Q1W2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.66■■□□□ 1.06
TRIM71Q2Q1W2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM71Q2Q1W2 INGX-201ENST00000359239 846 ntBASIC21.66■■□□□ 1.06
TRIM71Q2Q1W2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TRIM71Q2Q1W2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM71Q2Q1W2 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TRIM71Q2Q1W2 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.66■■□□□ 1.06
TRIM71Q2Q1W2 ECEL1P2-202ENST00000465689 757 ntBASIC21.66■■□□□ 1.06
TRIM71Q2Q1W2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM71Q2Q1W2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM71Q2Q1W2 C2orf69P3-201ENST00000565542 1120 ntBASIC21.66■■□□□ 1.06
TRIM71Q2Q1W2 NTF6B-201ENST00000591913 560 ntBASIC21.66■■□□□ 1.06
TRIM71Q2Q1W2 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TRIM71Q2Q1W2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.66■■□□□ 1.06
TRIM71Q2Q1W2 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.66■■□□□ 1.06
TRIM71Q2Q1W2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM71Q2Q1W2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM71Q2Q1W2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
TRIM71Q2Q1W2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
TRIM71Q2Q1W2 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.66■■□□□ 1.06
TRIM71Q2Q1W2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM71Q2Q1W2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM71Q2Q1W2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM71Q2Q1W2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM71Q2Q1W2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
TRIM71Q2Q1W2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM71Q2Q1W2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM71Q2Q1W2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
TRIM71Q2Q1W2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM71Q2Q1W2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
TRIM71Q2Q1W2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.65■■□□□ 1.06
TRIM71Q2Q1W2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
TRIM71Q2Q1W2 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM71Q2Q1W2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM71Q2Q1W2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM71Q2Q1W2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
TRIM71Q2Q1W2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM71Q2Q1W2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.64■■□□□ 1.06
TRIM71Q2Q1W2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TRIM71Q2Q1W2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRIM71Q2Q1W2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.64■■□□□ 1.06
TRIM71Q2Q1W2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRIM71Q2Q1W2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM71Q2Q1W2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.64■■□□□ 1.05
TRIM71Q2Q1W2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.64■■□□□ 1.05
TRIM71Q2Q1W2 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM71Q2Q1W2 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.64■■□□□ 1.05
TRIM71Q2Q1W2 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM71Q2Q1W2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM71Q2Q1W2 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM71Q2Q1W2 AC008040.2-201ENST00000461049 708 ntBASIC21.64■■□□□ 1.05
TRIM71Q2Q1W2 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.64■■□□□ 1.05
TRIM71Q2Q1W2 AC097488.1-201ENST00000507834 756 ntBASIC21.64■■□□□ 1.05
TRIM71Q2Q1W2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.64■■□□□ 1.05
TRIM71Q2Q1W2 AC130371.2-201ENST00000619443 611 ntBASIC21.64■■□□□ 1.05
TRIM71Q2Q1W2 AC131212.4-201ENST00000623606 975 ntBASIC21.64■■□□□ 1.05
TRIM71Q2Q1W2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM71Q2Q1W2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM71Q2Q1W2 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM71Q2Q1W2 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
TRIM71Q2Q1W2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
TRIM71Q2Q1W2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM71Q2Q1W2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM71Q2Q1W2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM71Q2Q1W2 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM71Q2Q1W2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM71Q2Q1W2 CRYGFP-201ENST00000418459 633 ntBASIC21.63■■□□□ 1.05
TRIM71Q2Q1W2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.63■■□□□ 1.05
TRIM71Q2Q1W2 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.63■■□□□ 1.05
TRIM71Q2Q1W2 FAM87A-204ENST00000613235 858 ntBASIC21.63■■□□□ 1.05
TRIM71Q2Q1W2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRIM71Q2Q1W2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms