Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.11■□□□□ 0.97
CDR2Q01850 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDR2Q01850 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDR2Q01850 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CDR2Q01850 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.1■□□□□ 0.97
CDR2Q01850 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDR2Q01850 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CDR2Q01850 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDR2Q01850 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDR2Q01850 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CDR2Q01850 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.1■□□□□ 0.97
CDR2Q01850 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.1■□□□□ 0.97
CDR2Q01850 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.1■□□□□ 0.97
CDR2Q01850 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.1■□□□□ 0.97
CDR2Q01850 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.1■□□□□ 0.97
CDR2Q01850 AC007952.6-201ENST00000573168 2673 ntBASIC21.1■□□□□ 0.97
CDR2Q01850 AC003957.1-201ENST00000625108 2673 ntBASIC21.1■□□□□ 0.97
CDR2Q01850 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDR2Q01850 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDR2Q01850 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.09■□□□□ 0.97
CDR2Q01850 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
CDR2Q01850 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.09■□□□□ 0.97
CDR2Q01850 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CDR2Q01850 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDR2Q01850 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDR2Q01850 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CDR2Q01850 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CDR2Q01850 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.09■□□□□ 0.97
CDR2Q01850 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.09■□□□□ 0.97
CDR2Q01850 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CDR2Q01850 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CDR2Q01850 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.09■□□□□ 0.97
CDR2Q01850 MIR4758-201ENST00000577688 71 ntBASIC21.09■□□□□ 0.97
CDR2Q01850 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.09■□□□□ 0.97
CDR2Q01850 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.09■□□□□ 0.97
CDR2Q01850 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDR2Q01850 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDR2Q01850 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDR2Q01850 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CDR2Q01850 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDR2Q01850 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDR2Q01850 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDR2Q01850 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDR2Q01850 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.09■□□□□ 0.97
CDR2Q01850 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDR2Q01850 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CDR2Q01850 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CDR2Q01850 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDR2Q01850 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDR2Q01850 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDR2Q01850 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDR2Q01850 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDR2Q01850 AC073210.2-201ENST00000430369 194 ntBASIC21.08■□□□□ 0.97
CDR2Q01850 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDR2Q01850 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDR2Q01850 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.08■□□□□ 0.97
CDR2Q01850 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDR2Q01850 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.08■□□□□ 0.97
CDR2Q01850 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.08■□□□□ 0.97
CDR2Q01850 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.08■□□□□ 0.97
CDR2Q01850 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.08■□□□□ 0.97
CDR2Q01850 AC005829.2-201ENST00000571422 1056 ntBASIC21.08■□□□□ 0.97
CDR2Q01850 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.08■□□□□ 0.97
CDR2Q01850 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDR2Q01850 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDR2Q01850 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.08■□□□□ 0.96
CDR2Q01850 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.08■□□□□ 0.96
CDR2Q01850 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDR2Q01850 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.08■□□□□ 0.96
CDR2Q01850 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDR2Q01850 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDR2Q01850 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.07■□□□□ 0.96
CDR2Q01850 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDR2Q01850 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDR2Q01850 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDR2Q01850 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDR2Q01850 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.07■□□□□ 0.96
CDR2Q01850 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.07■□□□□ 0.96
CDR2Q01850 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.07■□□□□ 0.96
CDR2Q01850 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDR2Q01850 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.07■□□□□ 0.96
CDR2Q01850 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.07■□□□□ 0.96
CDR2Q01850 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDR2Q01850 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.07■□□□□ 0.96
CDR2Q01850 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
CDR2Q01850 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.07■□□□□ 0.96
CDR2Q01850 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CDR2Q01850 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.07■□□□□ 0.96
CDR2Q01850 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDR2Q01850 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CDR2Q01850 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDR2Q01850 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDR2Q01850 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CDR2Q01850 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.06■□□□□ 0.96
CDR2Q01850 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CDR2Q01850 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.06■□□□□ 0.96
CDR2Q01850 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.06■□□□□ 0.96
CDR2Q01850 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDR2Q01850 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.06■□□□□ 0.96
CDR2Q01850 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms