Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PRKDCP78527 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
PRKDCP78527 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.43□□□□□ -0.1
PRKDCP78527 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
PRKDCP78527 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PRKDCP78527 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PRKDCP78527 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PRKDCP78527 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PRKDCP78527 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.43□□□□□ -0.1
PRKDCP78527 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PRKDCP78527 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC14.42□□□□□ -0.1
PRKDCP78527 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PRKDCP78527 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC14.42□□□□□ -0.1
PRKDCP78527 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PRKDCP78527 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PRKDCP78527 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.42□□□□□ -0.1
PRKDCP78527 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.42□□□□□ -0.1
PRKDCP78527 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PRKDCP78527 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PRKDCP78527 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PRKDCP78527 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.42□□□□□ -0.1
PRKDCP78527 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.42□□□□□ -0.1
PRKDCP78527 AL160237.2-201ENST00000556165 472 ntBASIC14.42□□□□□ -0.1
PRKDCP78527 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.42□□□□□ -0.1
PRKDCP78527 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
PRKDCP78527 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
PRKDCP78527 AL662844.1-201ENST00000546340 181 ntBASIC14.42□□□□□ -0.1
PRKDCP78527 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC14.42□□□□□ -0.1
PRKDCP78527 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
PRKDCP78527 AL031432.5-201ENST00000641059 760 ntBASIC14.42□□□□□ -0.1
PRKDCP78527 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.42□□□□□ -0.1
PRKDCP78527 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PRKDCP78527 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PRKDCP78527 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.42□□□□□ -0.1
PRKDCP78527 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PRKDCP78527 Z85996.1-201ENST00000494644 937 ntBASIC14.42□□□□□ -0.1
PRKDCP78527 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.42□□□□□ -0.1
PRKDCP78527 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC14.42□□□□□ -0.1
PRKDCP78527 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PRKDCP78527 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PRKDCP78527 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PRKDCP78527 AC079781.3-201ENST00000449110 356 ntBASIC14.41□□□□□ -0.1
PRKDCP78527 TSPY17P-201ENST00000450329 467 ntBASIC14.41□□□□□ -0.1
PRKDCP78527 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC14.41□□□□□ -0.1
PRKDCP78527 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC14.41□□□□□ -0.1
PRKDCP78527 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PRKDCP78527 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PRKDCP78527 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PRKDCP78527 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PRKDCP78527 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PRKDCP78527 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.41□□□□□ -0.1
PRKDCP78527 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC14.41□□□□□ -0.1
PRKDCP78527 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
PRKDCP78527 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PRKDCP78527 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PRKDCP78527 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PRKDCP78527 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC14.41□□□□□ -0.1
PRKDCP78527 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
PRKDCP78527 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
PRKDCP78527 TSPY19P-201ENST00000418461 509 ntBASIC14.41□□□□□ -0.1
PRKDCP78527 TSPY18P-201ENST00000441642 509 ntBASIC14.41□□□□□ -0.1
PRKDCP78527 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.41□□□□□ -0.1
PRKDCP78527 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PRKDCP78527 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PRKDCP78527 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRKDCP78527 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
PRKDCP78527 FAM220CP-201ENST00000395253 831 ntBASIC14.4□□□□□ -0.1
PRKDCP78527 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.4□□□□□ -0.1
PRKDCP78527 AP002414.4-201ENST00000589764 1148 ntBASIC14.4□□□□□ -0.1
PRKDCP78527 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
PRKDCP78527 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.4□□□□□ -0.1
PRKDCP78527 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC14.4□□□□□ -0.1
PRKDCP78527 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRKDCP78527 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.4□□□□□ -0.1
PRKDCP78527 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PRKDCP78527 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRKDCP78527 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRKDCP78527 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC14.4□□□□□ -0.1
PRKDCP78527 HLA-A-201ENST00000376802 1334 ntBASIC14.4□□□□□ -0.1
PRKDCP78527 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.4□□□□□ -0.1
PRKDCP78527 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.4□□□□□ -0.1
PRKDCP78527 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PRKDCP78527 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.4□□□□□ -0.1
PRKDCP78527 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PRKDCP78527 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.4□□□□□ -0.1
PRKDCP78527 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PRKDCP78527 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PRKDCP78527 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC14.39□□□□□ -0.11
PRKDCP78527 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.39□□□□□ -0.11
PRKDCP78527 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.39□□□□□ -0.11
PRKDCP78527 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
PRKDCP78527 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRKDCP78527 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PRKDCP78527 KRT8P8-201ENST00000434750 1448 ntBASIC14.39□□□□□ -0.11
PRKDCP78527 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PRKDCP78527 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.39□□□□□ -0.11
PRKDCP78527 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.39□□□□□ -0.11
PRKDCP78527 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.39□□□□□ -0.11
PRKDCP78527 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.39□□□□□ -0.11
PRKDCP78527 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms