Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.38
UBE2NP61088 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
UBE2NP61088 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.39■□□□□ 0.37
UBE2NP61088 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
UBE2NP61088 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
UBE2NP61088 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2NP61088 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2NP61088 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2NP61088 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.39■□□□□ 0.37
UBE2NP61088 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.39■□□□□ 0.37
UBE2NP61088 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2NP61088 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.39■□□□□ 0.37
UBE2NP61088 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.39■□□□□ 0.37
UBE2NP61088 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.39■□□□□ 0.37
UBE2NP61088 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.39■□□□□ 0.37
UBE2NP61088 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.39■□□□□ 0.37
UBE2NP61088 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2NP61088 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
UBE2NP61088 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2NP61088 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2NP61088 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
UBE2NP61088 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2NP61088 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2NP61088 LINC01006-201ENST00000333319 2292 ntBASIC17.38■□□□□ 0.37
UBE2NP61088 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2NP61088 AC092667.1-201ENST00000434301 2586 ntBASIC17.38■□□□□ 0.37
UBE2NP61088 AL512408.1-201ENST00000569378 2000 ntBASIC17.38■□□□□ 0.37
UBE2NP61088 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2NP61088 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2NP61088 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.38■□□□□ 0.37
UBE2NP61088 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2NP61088 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2NP61088 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.38■□□□□ 0.37
UBE2NP61088 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
UBE2NP61088 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.38■□□□□ 0.37
UBE2NP61088 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.38■□□□□ 0.37
UBE2NP61088 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.38■□□□□ 0.37
UBE2NP61088 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
UBE2NP61088 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2NP61088 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2NP61088 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.38■□□□□ 0.37
UBE2NP61088 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
UBE2NP61088 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2NP61088 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2NP61088 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2NP61088 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2NP61088 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.37■□□□□ 0.37
UBE2NP61088 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2NP61088 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2NP61088 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.37■□□□□ 0.37
UBE2NP61088 BX119927.1-201ENST00000636596 1552 ntBASIC17.37■□□□□ 0.37
UBE2NP61088 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2NP61088 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.37■□□□□ 0.37
UBE2NP61088 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
UBE2NP61088 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2NP61088 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2NP61088 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.37■□□□□ 0.37
UBE2NP61088 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2NP61088 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2NP61088 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
UBE2NP61088 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.37■□□□□ 0.37
UBE2NP61088 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.37■□□□□ 0.37
UBE2NP61088 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.37■□□□□ 0.37
UBE2NP61088 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2NP61088 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.37■□□□□ 0.37
UBE2NP61088 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
UBE2NP61088 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2NP61088 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2NP61088 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
UBE2NP61088 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2NP61088 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2NP61088 AC124283.5-201ENST00000624661 1809 ntBASIC17.37■□□□□ 0.37
UBE2NP61088 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2NP61088 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.37■□□□□ 0.37
UBE2NP61088 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2NP61088 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.37■□□□□ 0.37
UBE2NP61088 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2NP61088 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.37■□□□□ 0.37
UBE2NP61088 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2NP61088 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2NP61088 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.37■□□□□ 0.37
UBE2NP61088 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
UBE2NP61088 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
UBE2NP61088 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2NP61088 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
UBE2NP61088 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2NP61088 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.36■□□□□ 0.37
UBE2NP61088 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.36■□□□□ 0.37
UBE2NP61088 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.36■□□□□ 0.37
UBE2NP61088 AL157384.1-201ENST00000445995 2473 ntBASIC17.36■□□□□ 0.37
UBE2NP61088 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2NP61088 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2NP61088 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2NP61088 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2NP61088 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2NP61088 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.36■□□□□ 0.37
UBE2NP61088 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.36■□□□□ 0.37
UBE2NP61088 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2NP61088 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2NP61088 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms