Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN8P56748 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN8P56748 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN8P56748 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN8P56748 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CLDN8P56748 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN8P56748 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN8P56748 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN8P56748 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN8P56748 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN8P56748 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN8P56748 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CLDN8P56748 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN8P56748 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CLDN8P56748 AP000974.1-201ENST00000623909 2387 ntBASIC18.82■□□□□ 0.6
CLDN8P56748 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN8P56748 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN8P56748 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CLDN8P56748 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN8P56748 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN8P56748 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
CLDN8P56748 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN8P56748 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN8P56748 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN8P56748 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN8P56748 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN8P56748 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN8P56748 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN8P56748 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN8P56748 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN8P56748 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CLDN8P56748 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN8P56748 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN8P56748 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN8P56748 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.81■□□□□ 0.6
CLDN8P56748 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN8P56748 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CLDN8P56748 AC093787.1-201ENST00000450396 207 ntBASIC18.81■□□□□ 0.6
CLDN8P56748 AL162430.1-201ENST00000480705 870 ntBASIC18.81■□□□□ 0.6
CLDN8P56748 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN8P56748 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN8P56748 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN8P56748 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CLDN8P56748 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN8P56748 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN8P56748 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN8P56748 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN8P56748 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN8P56748 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
CLDN8P56748 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CLDN8P56748 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.81■□□□□ 0.6
CLDN8P56748 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN8P56748 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN8P56748 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN8P56748 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN8P56748 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN8P56748 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN8P56748 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN8P56748 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN8P56748 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN8P56748 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
CLDN8P56748 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.8■□□□□ 0.6
CLDN8P56748 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.8■□□□□ 0.6
CLDN8P56748 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN8P56748 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN8P56748 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN8P56748 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN8P56748 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN8P56748 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN8P56748 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN8P56748 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CLDN8P56748 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN8P56748 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN8P56748 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CLDN8P56748 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDN8P56748 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN8P56748 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN8P56748 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN8P56748 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN8P56748 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN8P56748 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN8P56748 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN8P56748 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN8P56748 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CLDN8P56748 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN8P56748 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.79■□□□□ 0.6
CLDN8P56748 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.79■□□□□ 0.6
CLDN8P56748 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CLDN8P56748 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN8P56748 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN8P56748 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN8P56748 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CLDN8P56748 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN8P56748 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN8P56748 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN8P56748 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN8P56748 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN8P56748 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CLDN8P56748 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CLDN8P56748 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms