Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC24.23■■□□□ 1.47
PDE1AP54750 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PDE1AP54750 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PDE1AP54750 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC24.22■■□□□ 1.47
PDE1AP54750 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PDE1AP54750 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PDE1AP54750 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PDE1AP54750 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PDE1AP54750 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC24.22■■□□□ 1.47
PDE1AP54750 POLI-202ENST00000406285 2030 ntTSL 2 BASIC24.22■■□□□ 1.47
PDE1AP54750 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PDE1AP54750 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
PDE1AP54750 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PDE1AP54750 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC24.22■■□□□ 1.47
PDE1AP54750 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC24.22■■□□□ 1.47
PDE1AP54750 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC24.22■■□□□ 1.47
PDE1AP54750 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC24.22■■□□□ 1.47
PDE1AP54750 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
PDE1AP54750 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC24.22■■□□□ 1.47
PDE1AP54750 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC24.22■■□□□ 1.47
PDE1AP54750 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
PDE1AP54750 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC24.21■■□□□ 1.47
PDE1AP54750 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
PDE1AP54750 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PDE1AP54750 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC24.21■■□□□ 1.47
PDE1AP54750 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC24.21■■□□□ 1.47
PDE1AP54750 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PDE1AP54750 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PDE1AP54750 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PDE1AP54750 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
PDE1AP54750 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
PDE1AP54750 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.21■■□□□ 1.47
PDE1AP54750 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC24.21■■□□□ 1.47
PDE1AP54750 KLF2-202ENST00000592003 564 ntTSL 3 BASIC24.21■■□□□ 1.47
PDE1AP54750 INO80E-214ENST00000620599 515 ntTSL 2 BASIC24.21■■□□□ 1.47
PDE1AP54750 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
PDE1AP54750 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
PDE1AP54750 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
PDE1AP54750 TFP1-202ENST00000475455 1573 ntBASIC24.2■■□□□ 1.47
PDE1AP54750 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC24.2■■□□□ 1.47
PDE1AP54750 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.47
PDE1AP54750 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC24.2■■□□□ 1.47
PDE1AP54750 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC24.2■■□□□ 1.47
PDE1AP54750 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
PDE1AP54750 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PDE1AP54750 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC24.2■■□□□ 1.46
PDE1AP54750 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
PDE1AP54750 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC24.2■■□□□ 1.46
PDE1AP54750 CALM3-202ENST00000391918 702 ntTSL 2 BASIC24.2■■□□□ 1.46
PDE1AP54750 RPS2P52-201ENST00000469610 820 ntBASIC24.2■■□□□ 1.46
PDE1AP54750 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC24.2■■□□□ 1.46
PDE1AP54750 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC24.2■■□□□ 1.46
PDE1AP54750 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
PDE1AP54750 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PDE1AP54750 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PDE1AP54750 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PDE1AP54750 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
PDE1AP54750 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
PDE1AP54750 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PDE1AP54750 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PDE1AP54750 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PDE1AP54750 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
PDE1AP54750 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PDE1AP54750 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PDE1AP54750 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PDE1AP54750 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
PDE1AP54750 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PDE1AP54750 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PDE1AP54750 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
PDE1AP54750 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PDE1AP54750 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
PDE1AP54750 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
PDE1AP54750 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PDE1AP54750 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC24.18■■□□□ 1.46
PDE1AP54750 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC24.18■■□□□ 1.46
PDE1AP54750 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
PDE1AP54750 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
PDE1AP54750 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PDE1AP54750 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
PDE1AP54750 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC24.18■■□□□ 1.46
PDE1AP54750 APTR-205ENST00000447009 902 ntTSL 2 BASIC24.18■■□□□ 1.46
PDE1AP54750 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC24.18■■□□□ 1.46
PDE1AP54750 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PDE1AP54750 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
PDE1AP54750 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC24.18■■□□□ 1.46
PDE1AP54750 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PDE1AP54750 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PDE1AP54750 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
PDE1AP54750 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PDE1AP54750 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PDE1AP54750 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC24.17■■□□□ 1.46
PDE1AP54750 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PDE1AP54750 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC24.17■■□□□ 1.46
PDE1AP54750 OR2A1-AS1-207ENST00000486094 819 ntBASIC24.17■■□□□ 1.46
PDE1AP54750 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC24.17■■□□□ 1.46
PDE1AP54750 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
PDE1AP54750 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
PDE1AP54750 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC24.17■■□□□ 1.46
PDE1AP54750 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC24.17■■□□□ 1.46
PDE1AP54750 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms