Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ITGA8P53708 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITGA8P53708 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
ITGA8P53708 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITGA8P53708 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ITGA8P53708 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ITGA8P53708 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITGA8P53708 KRT8P20-201ENST00000423953 1409 ntBASIC20.29■□□□□ 0.84
ITGA8P53708 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITGA8P53708 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITGA8P53708 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITGA8P53708 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITGA8P53708 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITGA8P53708 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITGA8P53708 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITGA8P53708 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ITGA8P53708 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
ITGA8P53708 AC013268.1-206ENST00000638368 961 ntBASIC20.29■□□□□ 0.84
ITGA8P53708 AC112229.1-201ENST00000639295 961 ntBASIC20.29■□□□□ 0.84
ITGA8P53708 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
ITGA8P53708 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ITGA8P53708 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.29■□□□□ 0.84
ITGA8P53708 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.29■□□□□ 0.84
ITGA8P53708 AC093503.3-201ENST00000624917 2352 ntBASIC20.29■□□□□ 0.84
ITGA8P53708 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ITGA8P53708 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ITGA8P53708 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ITGA8P53708 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.29■□□□□ 0.84
ITGA8P53708 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITGA8P53708 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
ITGA8P53708 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ITGA8P53708 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITGA8P53708 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ITGA8P53708 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITGA8P53708 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.28■□□□□ 0.84
ITGA8P53708 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITGA8P53708 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITGA8P53708 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITGA8P53708 MCRIP2P1-201ENST00000394346 511 ntBASIC20.28■□□□□ 0.84
ITGA8P53708 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
ITGA8P53708 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.28■□□□□ 0.84
ITGA8P53708 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ITGA8P53708 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
ITGA8P53708 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITGA8P53708 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.28■□□□□ 0.84
ITGA8P53708 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ITGA8P53708 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.27■□□□□ 0.84
ITGA8P53708 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ITGA8P53708 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ITGA8P53708 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ITGA8P53708 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ITGA8P53708 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ITGA8P53708 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ITGA8P53708 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ITGA8P53708 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.27■□□□□ 0.84
ITGA8P53708 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ITGA8P53708 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ITGA8P53708 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ITGA8P53708 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ITGA8P53708 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ITGA8P53708 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.27■□□□□ 0.84
ITGA8P53708 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ITGA8P53708 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.27■□□□□ 0.84
ITGA8P53708 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.27■□□□□ 0.84
ITGA8P53708 NTF6G-201ENST00000591094 616 ntBASIC20.27■□□□□ 0.84
ITGA8P53708 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ITGA8P53708 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ITGA8P53708 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ITGA8P53708 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.27■□□□□ 0.83
ITGA8P53708 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.83
ITGA8P53708 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ITGA8P53708 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.26■□□□□ 0.83
ITGA8P53708 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ITGA8P53708 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ITGA8P53708 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ITGA8P53708 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ITGA8P53708 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ITGA8P53708 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ITGA8P53708 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ITGA8P53708 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ITGA8P53708 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.26■□□□□ 0.83
ITGA8P53708 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.26■□□□□ 0.83
ITGA8P53708 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.26■□□□□ 0.83
ITGA8P53708 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.26■□□□□ 0.83
ITGA8P53708 AC087623.3-201ENST00000607047 1098 ntBASIC20.26■□□□□ 0.83
ITGA8P53708 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.26■□□□□ 0.83
ITGA8P53708 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
ITGA8P53708 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
ITGA8P53708 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ITGA8P53708 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ITGA8P53708 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ITGA8P53708 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ITGA8P53708 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
ITGA8P53708 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.26■□□□□ 0.83
ITGA8P53708 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ITGA8P53708 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.25■□□□□ 0.83
ITGA8P53708 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ITGA8P53708 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ITGA8P53708 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ITGA8P53708 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms