Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
PCP4P48539 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PCP4P48539 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCP4P48539 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.75□□□□□ -0.21
PCP4P48539 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCP4P48539 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
PCP4P48539 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCP4P48539 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCP4P48539 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCP4P48539 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
PCP4P48539 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.74□□□□□ -0.21
PCP4P48539 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC13.74□□□□□ -0.21
PCP4P48539 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCP4P48539 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCP4P48539 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
PCP4P48539 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCP4P48539 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
PCP4P48539 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCP4P48539 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
PCP4P48539 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCP4P48539 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC13.74□□□□□ -0.21
PCP4P48539 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC13.74□□□□□ -0.21
PCP4P48539 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCP4P48539 AC063926.3-201ENST00000624734 5658 ntBASIC13.74□□□□□ -0.21
PCP4P48539 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.74□□□□□ -0.21
PCP4P48539 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCP4P48539 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.74□□□□□ -0.21
PCP4P48539 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCP4P48539 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
PCP4P48539 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.74□□□□□ -0.21
PCP4P48539 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCP4P48539 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCP4P48539 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCP4P48539 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCP4P48539 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCP4P48539 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC13.74□□□□□ -0.21
PCP4P48539 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
PCP4P48539 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCP4P48539 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PCP4P48539 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PCP4P48539 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
PCP4P48539 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCP4P48539 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PCP4P48539 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PCP4P48539 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCP4P48539 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCP4P48539 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCP4P48539 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCP4P48539 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCP4P48539 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCP4P48539 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PCP4P48539 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PCP4P48539 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
PCP4P48539 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PCP4P48539 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCP4P48539 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC13.73□□□□□ -0.21
PCP4P48539 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PCP4P48539 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCP4P48539 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PCP4P48539 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCP4P48539 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCP4P48539 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCP4P48539 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
PCP4P48539 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCP4P48539 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PCP4P48539 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCP4P48539 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PCP4P48539 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PCP4P48539 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.73□□□□□ -0.21
PCP4P48539 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC13.73□□□□□ -0.21
PCP4P48539 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
PCP4P48539 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PCP4P48539 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCP4P48539 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PCP4P48539 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCP4P48539 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCP4P48539 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCP4P48539 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCP4P48539 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PCP4P48539 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
PCP4P48539 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCP4P48539 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCP4P48539 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCP4P48539 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC13.72□□□□□ -0.21
PCP4P48539 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCP4P48539 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.72□□□□□ -0.21
PCP4P48539 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCP4P48539 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PCP4P48539 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCP4P48539 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC13.72□□□□□ -0.21
PCP4P48539 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCP4P48539 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
PCP4P48539 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCP4P48539 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
PCP4P48539 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCP4P48539 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCP4P48539 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PCP4P48539 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
PCP4P48539 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
PCP4P48539 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms