Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.86■□□□□ 0.93
RFC1P35251 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
RFC1P35251 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFC1P35251 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFC1P35251 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RFC1P35251 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.86■□□□□ 0.93
RFC1P35251 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RFC1P35251 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RFC1P35251 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RFC1P35251 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFC1P35251 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFC1P35251 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFC1P35251 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RFC1P35251 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.85■□□□□ 0.93
RFC1P35251 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RFC1P35251 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RFC1P35251 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFC1P35251 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.85■□□□□ 0.93
RFC1P35251 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RFC1P35251 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFC1P35251 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RFC1P35251 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.85■□□□□ 0.93
RFC1P35251 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFC1P35251 AC005829.2-201ENST00000571422 1056 ntBASIC20.85■□□□□ 0.93
RFC1P35251 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.85■□□□□ 0.93
RFC1P35251 AC133041.1-202ENST00000642053 222 ntBASIC20.85■□□□□ 0.93
RFC1P35251 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFC1P35251 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.85■□□□□ 0.93
RFC1P35251 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFC1P35251 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RFC1P35251 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFC1P35251 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RFC1P35251 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFC1P35251 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RFC1P35251 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFC1P35251 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFC1P35251 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFC1P35251 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFC1P35251 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RFC1P35251 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RFC1P35251 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFC1P35251 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.84■□□□□ 0.93
RFC1P35251 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.84■□□□□ 0.93
RFC1P35251 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.84■□□□□ 0.93
RFC1P35251 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
RFC1P35251 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFC1P35251 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RFC1P35251 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFC1P35251 AC009237.14-201ENST00000609975 1594 ntBASIC20.84■□□□□ 0.93
RFC1P35251 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RFC1P35251 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RFC1P35251 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RFC1P35251 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RFC1P35251 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.83■□□□□ 0.93
RFC1P35251 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFC1P35251 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFC1P35251 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
RFC1P35251 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
RFC1P35251 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.83■□□□□ 0.93
RFC1P35251 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RFC1P35251 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFC1P35251 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFC1P35251 ID1-201ENST00000376105 1233 ntBASIC20.83■□□□□ 0.93
RFC1P35251 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.83■□□□□ 0.93
RFC1P35251 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.83■□□□□ 0.93
RFC1P35251 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RFC1P35251 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.83■□□□□ 0.93
RFC1P35251 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
RFC1P35251 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.83■□□□□ 0.92
RFC1P35251 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RFC1P35251 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RFC1P35251 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RFC1P35251 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RFC1P35251 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
RFC1P35251 AL158211.5-201ENST00000623583 2518 ntBASIC20.82■□□□□ 0.92
RFC1P35251 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFC1P35251 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.82■□□□□ 0.92
RFC1P35251 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.82■□□□□ 0.92
RFC1P35251 PHGDH-210ENST00000641115 1638 ntBASIC20.82■□□□□ 0.92
RFC1P35251 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
RFC1P35251 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFC1P35251 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.82■□□□□ 0.92
RFC1P35251 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.82■□□□□ 0.92
RFC1P35251 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
RFC1P35251 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.82■□□□□ 0.92
RFC1P35251 AL355802.2-201ENST00000402069 882 ntBASIC20.82■□□□□ 0.92
RFC1P35251 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.82■□□□□ 0.92
RFC1P35251 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RFC1P35251 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFC1P35251 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RFC1P35251 HLA-B-256ENST00000639848 1089 ntBASIC20.82■□□□□ 0.92
RFC1P35251 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.82■□□□□ 0.92
RFC1P35251 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.82■□□□□ 0.92
RFC1P35251 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.82■□□□□ 0.92
RFC1P35251 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.82■□□□□ 0.92
RFC1P35251 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.82■□□□□ 0.92
RFC1P35251 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RFC1P35251 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.81■□□□□ 0.92
RFC1P35251 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RFC1P35251 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms