Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC12P31275 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC12P31275 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HOXC12P31275 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC12P31275 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC12P31275 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC12P31275 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.56■□□□□ 0.4
HOXC12P31275 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HOXC12P31275 BX088651.1-201ENST00000540551 451 ntBASIC17.56■□□□□ 0.4
HOXC12P31275 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HOXC12P31275 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
HOXC12P31275 AL031963.3-201ENST00000606441 850 ntBASIC17.56■□□□□ 0.4
HOXC12P31275 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
HOXC12P31275 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC12P31275 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC12P31275 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.56■□□□□ 0.4
HOXC12P31275 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC12P31275 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC12P31275 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC12P31275 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC12P31275 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXC12P31275 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC12P31275 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC12P31275 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC12P31275 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
HOXC12P31275 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HOXC12P31275 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.55■□□□□ 0.4
HOXC12P31275 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC12P31275 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXC12P31275 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXC12P31275 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXC12P31275 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
HOXC12P31275 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.55■□□□□ 0.4
HOXC12P31275 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC12P31275 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.55■□□□□ 0.4
HOXC12P31275 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.55■□□□□ 0.4
HOXC12P31275 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HOXC12P31275 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXC12P31275 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC12P31275 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.55■□□□□ 0.4
HOXC12P31275 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.55■□□□□ 0.4
HOXC12P31275 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC12P31275 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXC12P31275 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HOXC12P31275 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC12P31275 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC12P31275 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.54■□□□□ 0.4
HOXC12P31275 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC12P31275 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXC12P31275 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXC12P31275 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXC12P31275 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC12P31275 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HOXC12P31275 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.54■□□□□ 0.4
HOXC12P31275 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.54■□□□□ 0.4
HOXC12P31275 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.54■□□□□ 0.4
HOXC12P31275 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HOXC12P31275 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXC12P31275 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.54■□□□□ 0.4
HOXC12P31275 AC233263.1-201ENST00000578059 224 ntBASIC17.54■□□□□ 0.4
HOXC12P31275 AC069544.1-201ENST00000609399 999 ntBASIC17.54■□□□□ 0.4
HOXC12P31275 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.54■□□□□ 0.4
HOXC12P31275 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
HOXC12P31275 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXC12P31275 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.54■□□□□ 0.4
HOXC12P31275 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC12P31275 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.53■□□□□ 0.4
HOXC12P31275 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC12P31275 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.53■□□□□ 0.4
HOXC12P31275 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.53■□□□□ 0.4
HOXC12P31275 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC12P31275 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.53■□□□□ 0.4
HOXC12P31275 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC12P31275 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC12P31275 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC12P31275 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC12P31275 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC12P31275 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.53■□□□□ 0.4
HOXC12P31275 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC12P31275 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC12P31275 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.53■□□□□ 0.4
HOXC12P31275 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC12P31275 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HOXC12P31275 POM121L13P-201ENST00000422362 380 ntBASIC17.53■□□□□ 0.4
HOXC12P31275 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC12P31275 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC12P31275 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
HOXC12P31275 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.53■□□□□ 0.4
HOXC12P31275 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC12P31275 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC12P31275 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.53■□□□□ 0.4
HOXC12P31275 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.53■□□□□ 0.4
HOXC12P31275 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HOXC12P31275 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC12P31275 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC12P31275 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC12P31275 KRT17P2-201ENST00000300992 1314 ntBASIC17.52■□□□□ 0.4
HOXC12P31275 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
HOXC12P31275 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC12P31275 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms