Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.1■□□□□ 0.33
CD40P25942 AF186192.3-201ENST00000583427 947 ntBASIC17.1■□□□□ 0.33
CD40P25942 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.1■□□□□ 0.33
CD40P25942 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.1■□□□□ 0.33
CD40P25942 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD40P25942 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.1■□□□□ 0.33
CD40P25942 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CD40P25942 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD40P25942 TFP1-202ENST00000475455 1573 ntBASIC17.1■□□□□ 0.33
CD40P25942 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CD40P25942 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.1■□□□□ 0.33
CD40P25942 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD40P25942 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.09■□□□□ 0.33
CD40P25942 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD40P25942 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD40P25942 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD40P25942 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CD40P25942 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CD40P25942 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.09■□□□□ 0.33
CD40P25942 KRT17P2-201ENST00000300992 1314 ntBASIC17.09■□□□□ 0.33
CD40P25942 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD40P25942 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD40P25942 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD40P25942 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CD40P25942 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD40P25942 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD40P25942 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD40P25942 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD40P25942 AC073314.1-201ENST00000568729 2216 ntBASIC17.09■□□□□ 0.33
CD40P25942 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.08■□□□□ 0.33
CD40P25942 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.08■□□□□ 0.33
CD40P25942 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CD40P25942 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CD40P25942 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.08■□□□□ 0.33
CD40P25942 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CD40P25942 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.08■□□□□ 0.33
CD40P25942 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CD40P25942 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CD40P25942 BX119927.1-201ENST00000636596 1552 ntBASIC17.08■□□□□ 0.32
CD40P25942 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.08■□□□□ 0.32
CD40P25942 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CD40P25942 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CD40P25942 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.08■□□□□ 0.32
CD40P25942 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CD40P25942 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.08■□□□□ 0.32
CD40P25942 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.08■□□□□ 0.32
CD40P25942 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.08■□□□□ 0.32
CD40P25942 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CD40P25942 MIR4785-201ENST00000585005 73 ntBASIC17.08■□□□□ 0.32
CD40P25942 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.08■□□□□ 0.32
CD40P25942 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.08■□□□□ 0.32
CD40P25942 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.08■□□□□ 0.32
CD40P25942 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.08■□□□□ 0.32
CD40P25942 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CD40P25942 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CD40P25942 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CD40P25942 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CD40P25942 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CD40P25942 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CD40P25942 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CD40P25942 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD40P25942 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD40P25942 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD40P25942 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD40P25942 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
CD40P25942 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.07■□□□□ 0.32
CD40P25942 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.07■□□□□ 0.32
CD40P25942 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.07■□□□□ 0.32
CD40P25942 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD40P25942 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.07■□□□□ 0.32
CD40P25942 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.07■□□□□ 0.32
CD40P25942 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.07■□□□□ 0.32
CD40P25942 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.07■□□□□ 0.32
CD40P25942 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CD40P25942 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.07■□□□□ 0.32
CD40P25942 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.07■□□□□ 0.32
CD40P25942 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CD40P25942 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.07■□□□□ 0.32
CD40P25942 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.07■□□□□ 0.32
CD40P25942 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.07■□□□□ 0.32
CD40P25942 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD40P25942 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CD40P25942 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD40P25942 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.07■□□□□ 0.32
CD40P25942 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.07■□□□□ 0.32
CD40P25942 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD40P25942 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD40P25942 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.07■□□□□ 0.32
CD40P25942 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CD40P25942 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD40P25942 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CD40P25942 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CD40P25942 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
CD40P25942 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD40P25942 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD40P25942 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD40P25942 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD40P25942 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD40P25942 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD40P25942 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms