Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
BCKDHBP21953 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BCKDHBP21953 TFP1-202ENST00000475455 1573 ntBASIC19.64■□□□□ 0.73
BCKDHBP21953 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BCKDHBP21953 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BCKDHBP21953 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.64■□□□□ 0.73
BCKDHBP21953 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BCKDHBP21953 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BCKDHBP21953 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.63■□□□□ 0.73
BCKDHBP21953 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
BCKDHBP21953 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BCKDHBP21953 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
BCKDHBP21953 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.63■□□□□ 0.73
BCKDHBP21953 YBX1P10-201ENST00000444752 975 ntBASIC19.63■□□□□ 0.73
BCKDHBP21953 AC128688.1-201ENST00000487626 519 ntBASIC19.63■□□□□ 0.73
BCKDHBP21953 KRT18P16-201ENST00000510337 1294 ntBASIC19.63■□□□□ 0.73
BCKDHBP21953 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.63■□□□□ 0.73
BCKDHBP21953 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.63■□□□□ 0.73
BCKDHBP21953 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.63■□□□□ 0.73
BCKDHBP21953 SLC25A1P4-201ENST00000567977 778 ntBASIC19.63■□□□□ 0.73
BCKDHBP21953 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
BCKDHBP21953 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
BCKDHBP21953 AC131212.4-201ENST00000623606 975 ntBASIC19.63■□□□□ 0.73
BCKDHBP21953 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.63■□□□□ 0.73
BCKDHBP21953 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
BCKDHBP21953 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BCKDHBP21953 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
BCKDHBP21953 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BCKDHBP21953 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BCKDHBP21953 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.63■□□□□ 0.73
BCKDHBP21953 DPP3P2-201ENST00000416030 1696 ntBASIC19.62■□□□□ 0.73
BCKDHBP21953 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BCKDHBP21953 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BCKDHBP21953 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
BCKDHBP21953 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BCKDHBP21953 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.62■□□□□ 0.73
BCKDHBP21953 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
BCKDHBP21953 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
BCKDHBP21953 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BCKDHBP21953 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BCKDHBP21953 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BCKDHBP21953 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BCKDHBP21953 AC117947.1-201ENST00000427448 529 ntBASIC19.62■□□□□ 0.73
BCKDHBP21953 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.62■□□□□ 0.73
BCKDHBP21953 TUBB8P6-201ENST00000436895 1288 ntBASIC19.62■□□□□ 0.73
BCKDHBP21953 BX664615.1-201ENST00000443558 458 ntBASIC19.62■□□□□ 0.73
BCKDHBP21953 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.62■□□□□ 0.73
BCKDHBP21953 AC063952.2-201ENST00000498792 1227 ntBASIC19.62■□□□□ 0.73
BCKDHBP21953 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BCKDHBP21953 AL358472.4-201ENST00000633140 710 ntBASIC19.62■□□□□ 0.73
BCKDHBP21953 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.62■□□□□ 0.73
BCKDHBP21953 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
BCKDHBP21953 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BCKDHBP21953 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BCKDHBP21953 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BCKDHBP21953 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BCKDHBP21953 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
BCKDHBP21953 AC018553.1-201ENST00000616682 1458 ntBASIC19.61■□□□□ 0.73
BCKDHBP21953 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BCKDHBP21953 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BCKDHBP21953 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BCKDHBP21953 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
BCKDHBP21953 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
BCKDHBP21953 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
BCKDHBP21953 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
BCKDHBP21953 UPK3BP1-201ENST00000428678 509 ntBASIC19.61■□□□□ 0.73
BCKDHBP21953 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.61■□□□□ 0.73
BCKDHBP21953 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.61■□□□□ 0.73
BCKDHBP21953 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BCKDHBP21953 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.61■□□□□ 0.73
BCKDHBP21953 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BCKDHBP21953 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BCKDHBP21953 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BCKDHBP21953 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BCKDHBP21953 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.6■□□□□ 0.73
BCKDHBP21953 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.6■□□□□ 0.73
BCKDHBP21953 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BCKDHBP21953 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.6■□□□□ 0.73
BCKDHBP21953 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.6■□□□□ 0.73
BCKDHBP21953 AC008040.2-201ENST00000461049 708 ntBASIC19.6■□□□□ 0.73
BCKDHBP21953 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.6■□□□□ 0.73
BCKDHBP21953 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.6■□□□□ 0.73
BCKDHBP21953 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.6■□□□□ 0.73
BCKDHBP21953 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
BCKDHBP21953 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BCKDHBP21953 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BCKDHBP21953 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BCKDHBP21953 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.59■□□□□ 0.73
BCKDHBP21953 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BCKDHBP21953 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BCKDHBP21953 AC079834.2-201ENST00000609776 1949 ntBASIC19.59■□□□□ 0.73
BCKDHBP21953 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BCKDHBP21953 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BCKDHBP21953 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BCKDHBP21953 FP700111.2-201ENST00000619190 1892 ntBASIC19.59■□□□□ 0.73
BCKDHBP21953 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
BCKDHBP21953 RCC2P6-201ENST00000526625 1557 ntBASIC19.59■□□□□ 0.73
BCKDHBP21953 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
BCKDHBP21953 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BCKDHBP21953 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms