Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
H2AFXP16104 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
H2AFXP16104 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
H2AFXP16104 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
H2AFXP16104 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
H2AFXP16104 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
H2AFXP16104 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
H2AFXP16104 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
H2AFXP16104 MKRN4P-201ENST00000444706 1521 ntBASIC20.59■□□□□ 0.89
H2AFXP16104 AC012313.1-201ENST00000593393 3059 ntBASIC20.59■□□□□ 0.89
H2AFXP16104 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
H2AFXP16104 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.59■□□□□ 0.89
H2AFXP16104 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.59■□□□□ 0.89
H2AFXP16104 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
H2AFXP16104 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.59■□□□□ 0.89
H2AFXP16104 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.59■□□□□ 0.89
H2AFXP16104 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
H2AFXP16104 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
H2AFXP16104 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
H2AFXP16104 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
H2AFXP16104 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
H2AFXP16104 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
H2AFXP16104 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
H2AFXP16104 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
H2AFXP16104 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
H2AFXP16104 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.59■□□□□ 0.89
H2AFXP16104 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
H2AFXP16104 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.59■□□□□ 0.89
H2AFXP16104 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
H2AFXP16104 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
H2AFXP16104 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
H2AFXP16104 FP475955.4-201ENST00000623131 1990 ntBASIC20.58■□□□□ 0.89
H2AFXP16104 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
H2AFXP16104 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.58■□□□□ 0.89
H2AFXP16104 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.58■□□□□ 0.89
H2AFXP16104 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
H2AFXP16104 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
H2AFXP16104 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
H2AFXP16104 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.58■□□□□ 0.88
H2AFXP16104 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.58■□□□□ 0.88
H2AFXP16104 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
H2AFXP16104 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
H2AFXP16104 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
H2AFXP16104 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
H2AFXP16104 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
H2AFXP16104 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.57■□□□□ 0.88
H2AFXP16104 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
H2AFXP16104 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.57■□□□□ 0.88
H2AFXP16104 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.57■□□□□ 0.88
H2AFXP16104 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.57■□□□□ 0.88
H2AFXP16104 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
H2AFXP16104 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.57■□□□□ 0.88
H2AFXP16104 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
H2AFXP16104 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
H2AFXP16104 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.56■□□□□ 0.88
H2AFXP16104 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H2AFXP16104 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H2AFXP16104 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H2AFXP16104 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
H2AFXP16104 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.56■□□□□ 0.88
H2AFXP16104 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
H2AFXP16104 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.56■□□□□ 0.88
H2AFXP16104 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
H2AFXP16104 KRT125P-201ENST00000546827 989 ntBASIC20.56■□□□□ 0.88
H2AFXP16104 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.56■□□□□ 0.88
H2AFXP16104 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H2AFXP16104 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.56■□□□□ 0.88
H2AFXP16104 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H2AFXP16104 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
H2AFXP16104 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H2AFXP16104 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
H2AFXP16104 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
H2AFXP16104 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
H2AFXP16104 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
H2AFXP16104 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2AFXP16104 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.55■□□□□ 0.88
H2AFXP16104 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2AFXP16104 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2AFXP16104 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
H2AFXP16104 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.55■□□□□ 0.88
H2AFXP16104 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.55■□□□□ 0.88
H2AFXP16104 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2AFXP16104 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
H2AFXP16104 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
H2AFXP16104 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.55■□□□□ 0.88
H2AFXP16104 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
H2AFXP16104 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.55■□□□□ 0.88
H2AFXP16104 MIR4787-201ENST00000607364 84 ntBASIC20.55■□□□□ 0.88
H2AFXP16104 MIR6724-1-201ENST00000616420 92 ntBASIC20.55■□□□□ 0.88
H2AFXP16104 MIR6724-2-201ENST00000616483 92 ntBASIC20.55■□□□□ 0.88
H2AFXP16104 MIR6724-4-201ENST00000617390 92 ntBASIC20.55■□□□□ 0.88
H2AFXP16104 MIR6724-3-201ENST00000622482 92 ntBASIC20.55■□□□□ 0.88
H2AFXP16104 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
H2AFXP16104 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
H2AFXP16104 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2AFXP16104 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2AFXP16104 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
H2AFXP16104 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.54■□□□□ 0.88
H2AFXP16104 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
H2AFXP16104 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms