Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
BRAFP15056 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
BRAFP15056 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.31■□□□□ 0.84
BRAFP15056 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
BRAFP15056 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
BRAFP15056 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRAFP15056 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BRAFP15056 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BRAFP15056 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.31■□□□□ 0.84
BRAFP15056 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BRAFP15056 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRAFP15056 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRAFP15056 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRAFP15056 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRAFP15056 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
BRAFP15056 AC016405.3-201ENST00000607710 860 ntBASIC20.31■□□□□ 0.84
BRAFP15056 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
BRAFP15056 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BRAFP15056 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BRAFP15056 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRAFP15056 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRAFP15056 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRAFP15056 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BRAFP15056 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BRAFP15056 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BRAFP15056 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRAFP15056 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.3■□□□□ 0.84
BRAFP15056 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BRAFP15056 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.3■□□□□ 0.84
BRAFP15056 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.3■□□□□ 0.84
BRAFP15056 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRAFP15056 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
BRAFP15056 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRAFP15056 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
BRAFP15056 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.3■□□□□ 0.84
BRAFP15056 AF201337.1-201ENST00000520239 748 ntBASIC20.3■□□□□ 0.84
BRAFP15056 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
BRAFP15056 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.3■□□□□ 0.84
BRAFP15056 AL162412.1-201ENST00000567129 965 ntBASIC20.3■□□□□ 0.84
BRAFP15056 AC105036.2-201ENST00000569468 176 ntBASIC20.3■□□□□ 0.84
BRAFP15056 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.3■□□□□ 0.84
BRAFP15056 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRAFP15056 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.3■□□□□ 0.84
BRAFP15056 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
BRAFP15056 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRAFP15056 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
BRAFP15056 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRAFP15056 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
BRAFP15056 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.29■□□□□ 0.84
BRAFP15056 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRAFP15056 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRAFP15056 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRAFP15056 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
BRAFP15056 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
BRAFP15056 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRAFP15056 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRAFP15056 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRAFP15056 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRAFP15056 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BRAFP15056 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.29■□□□□ 0.84
BRAFP15056 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
BRAFP15056 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.29■□□□□ 0.84
BRAFP15056 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.29■□□□□ 0.84
BRAFP15056 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRAFP15056 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.29■□□□□ 0.84
BRAFP15056 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.29■□□□□ 0.84
BRAFP15056 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
BRAFP15056 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
BRAFP15056 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
BRAFP15056 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BRAFP15056 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRAFP15056 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
BRAFP15056 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
BRAFP15056 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.28■□□□□ 0.84
BRAFP15056 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.28■□□□□ 0.84
BRAFP15056 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRAFP15056 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRAFP15056 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
BRAFP15056 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.28■□□□□ 0.84
BRAFP15056 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRAFP15056 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
BRAFP15056 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BRAFP15056 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BRAFP15056 AC093787.1-201ENST00000450396 207 ntBASIC20.28■□□□□ 0.84
BRAFP15056 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.28■□□□□ 0.84
BRAFP15056 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.28■□□□□ 0.84
BRAFP15056 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.28■□□□□ 0.84
BRAFP15056 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRAFP15056 OR10C1-204ENST00000622521 1039 ntBASIC20.28■□□□□ 0.84
BRAFP15056 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRAFP15056 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRAFP15056 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
BRAFP15056 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRAFP15056 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRAFP15056 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BRAFP15056 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
BRAFP15056 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.28■□□□□ 0.84
BRAFP15056 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
BRAFP15056 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRAFP15056 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms