Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CD48P09326 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CD48P09326 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.54■□□□□ 0.88
CD48P09326 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CD48P09326 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CD48P09326 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CD48P09326 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CD48P09326 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CD48P09326 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.54■□□□□ 0.88
CD48P09326 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD48P09326 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD48P09326 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD48P09326 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
CD48P09326 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CD48P09326 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD48P09326 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CD48P09326 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.53■□□□□ 0.88
CD48P09326 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.53■□□□□ 0.88
CD48P09326 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.53■□□□□ 0.88
CD48P09326 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CD48P09326 AC005829.2-201ENST00000571422 1056 ntBASIC20.53■□□□□ 0.88
CD48P09326 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.53■□□□□ 0.88
CD48P09326 AC083880.1-201ENST00000608266 535 ntBASIC20.53■□□□□ 0.88
CD48P09326 AC006557.6-201ENST00000623071 864 ntBASIC20.53■□□□□ 0.88
CD48P09326 AP001271.2-201ENST00000624018 1556 ntBASIC20.53■□□□□ 0.88
CD48P09326 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CD48P09326 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.53■□□□□ 0.88
CD48P09326 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CD48P09326 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD48P09326 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.53■□□□□ 0.88
CD48P09326 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CD48P09326 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CD48P09326 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CD48P09326 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CD48P09326 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CD48P09326 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CD48P09326 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CD48P09326 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CD48P09326 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CD48P09326 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.52■□□□□ 0.88
CD48P09326 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CD48P09326 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.52■□□□□ 0.88
CD48P09326 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CD48P09326 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.87
CD48P09326 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CD48P09326 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.51■□□□□ 0.87
CD48P09326 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.51■□□□□ 0.87
CD48P09326 AC124283.5-201ENST00000624661 1809 ntBASIC20.51■□□□□ 0.87
CD48P09326 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD48P09326 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD48P09326 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CD48P09326 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CD48P09326 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.51■□□□□ 0.87
CD48P09326 AC097658.1-201ENST00000475555 843 ntBASIC20.51■□□□□ 0.87
CD48P09326 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD48P09326 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.51■□□□□ 0.87
CD48P09326 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CD48P09326 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.51■□□□□ 0.87
CD48P09326 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CD48P09326 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD48P09326 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD48P09326 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CD48P09326 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.51■□□□□ 0.87
CD48P09326 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.5■□□□□ 0.87
CD48P09326 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CD48P09326 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.5■□□□□ 0.87
CD48P09326 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CD48P09326 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.5■□□□□ 0.87
CD48P09326 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.5■□□□□ 0.87
CD48P09326 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD48P09326 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CD48P09326 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD48P09326 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.5■□□□□ 0.87
CD48P09326 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
CD48P09326 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CD48P09326 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CD48P09326 AC018553.1-201ENST00000616682 1458 ntBASIC20.5■□□□□ 0.87
CD48P09326 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD48P09326 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CD48P09326 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.49■□□□□ 0.87
CD48P09326 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD48P09326 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD48P09326 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CD48P09326 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.49■□□□□ 0.87
CD48P09326 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CD48P09326 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.49■□□□□ 0.87
CD48P09326 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.49■□□□□ 0.87
CD48P09326 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.49■□□□□ 0.87
CD48P09326 AC142086.2-201ENST00000569753 217 ntBASIC20.49■□□□□ 0.87
CD48P09326 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.49■□□□□ 0.87
CD48P09326 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
CD48P09326 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD48P09326 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD48P09326 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD48P09326 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.49■□□□□ 0.87
CD48P09326 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.49■□□□□ 0.87
CD48P09326 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CD48P09326 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.49■□□□□ 0.87
CD48P09326 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD48P09326 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms