Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LCATP04180 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.31■□□□□ 0.36
LCATP04180 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.31■□□□□ 0.36
LCATP04180 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCATP04180 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LCATP04180 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
LCATP04180 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LCATP04180 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LCATP04180 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LCATP04180 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LCATP04180 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LCATP04180 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LCATP04180 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.3■□□□□ 0.36
LCATP04180 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.3■□□□□ 0.36
LCATP04180 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LCATP04180 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LCATP04180 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LCATP04180 TMEM179-206ENST00000616017 1645 ntBASIC17.3■□□□□ 0.36
LCATP04180 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LCATP04180 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LCATP04180 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LCATP04180 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.3■□□□□ 0.36
LCATP04180 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.3■□□□□ 0.36
LCATP04180 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.3■□□□□ 0.36
LCATP04180 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.3■□□□□ 0.36
LCATP04180 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.3■□□□□ 0.36
LCATP04180 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LCATP04180 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LCATP04180 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LCATP04180 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LCATP04180 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LCATP04180 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LCATP04180 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LCATP04180 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.3■□□□□ 0.36
LCATP04180 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
LCATP04180 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCATP04180 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCATP04180 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LCATP04180 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.29■□□□□ 0.36
LCATP04180 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCATP04180 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCATP04180 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.29■□□□□ 0.36
LCATP04180 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
LCATP04180 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.29■□□□□ 0.36
LCATP04180 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LCATP04180 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.29■□□□□ 0.36
LCATP04180 DUSP5P2-201ENST00000426873 1033 ntBASIC17.29■□□□□ 0.36
LCATP04180 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.29■□□□□ 0.36
LCATP04180 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.29■□□□□ 0.36
LCATP04180 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.29■□□□□ 0.36
LCATP04180 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.29■□□□□ 0.36
LCATP04180 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.29■□□□□ 0.36
LCATP04180 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.29■□□□□ 0.36
LCATP04180 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.29■□□□□ 0.36
LCATP04180 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.29■□□□□ 0.36
LCATP04180 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCATP04180 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCATP04180 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LCATP04180 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LCATP04180 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LCATP04180 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCATP04180 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCATP04180 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LCATP04180 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.29■□□□□ 0.36
LCATP04180 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.28■□□□□ 0.36
LCATP04180 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LCATP04180 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LCATP04180 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LCATP04180 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.28■□□□□ 0.36
LCATP04180 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.28■□□□□ 0.36
LCATP04180 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
LCATP04180 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LCATP04180 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LCATP04180 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LCATP04180 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.28■□□□□ 0.36
LCATP04180 TSPY6P-201ENST00000448518 926 ntBASIC17.28■□□□□ 0.36
LCATP04180 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.28■□□□□ 0.36
LCATP04180 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.28■□□□□ 0.36
LCATP04180 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.28■□□□□ 0.36
LCATP04180 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LCATP04180 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LCATP04180 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LCATP04180 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
LCATP04180 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
LCATP04180 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCATP04180 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCATP04180 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCATP04180 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.27■□□□□ 0.36
LCATP04180 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCATP04180 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LCATP04180 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCATP04180 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
LCATP04180 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LCATP04180 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
LCATP04180 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.27■□□□□ 0.36
LCATP04180 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.27■□□□□ 0.36
LCATP04180 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.27■□□□□ 0.36
LCATP04180 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LCATP04180 MIR4758-201ENST00000577688 71 ntBASIC17.27■□□□□ 0.36
LCATP04180 AC092118.2-201ENST00000613495 667 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms