Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 AC120498.9-201ENST00000339021 3867 ntBASIC20.11■□□□□ 0.81
MT-ND3P03897 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.11■□□□□ 0.81
MT-ND3P03897 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MT-ND3P03897 AC093484.2-201ENST00000580996 2166 ntBASIC20.11■□□□□ 0.81
MT-ND3P03897 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.11■□□□□ 0.81
MT-ND3P03897 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
MT-ND3P03897 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MT-ND3P03897 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MT-ND3P03897 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.11■□□□□ 0.81
MT-ND3P03897 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MT-ND3P03897 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.11■□□□□ 0.81
MT-ND3P03897 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MT-ND3P03897 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.11■□□□□ 0.81
MT-ND3P03897 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.11■□□□□ 0.81
MT-ND3P03897 AC013268.1-206ENST00000638368 961 ntBASIC20.11■□□□□ 0.81
MT-ND3P03897 AC112229.1-201ENST00000639295 961 ntBASIC20.11■□□□□ 0.81
MT-ND3P03897 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
MT-ND3P03897 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.11■□□□□ 0.81
MT-ND3P03897 TREX1-205ENST00000625293 1783 ntBASIC20.11■□□□□ 0.81
MT-ND3P03897 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.1■□□□□ 0.81
MT-ND3P03897 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.1■□□□□ 0.81
MT-ND3P03897 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MT-ND3P03897 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.1■□□□□ 0.81
MT-ND3P03897 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
MT-ND3P03897 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MT-ND3P03897 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MT-ND3P03897 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.1■□□□□ 0.81
MT-ND3P03897 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MT-ND3P03897 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MT-ND3P03897 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
MT-ND3P03897 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
MT-ND3P03897 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.1■□□□□ 0.81
MT-ND3P03897 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
MT-ND3P03897 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.1■□□□□ 0.81
MT-ND3P03897 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
MT-ND3P03897 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
MT-ND3P03897 AC243732.1-201ENST00000612648 864 ntBASIC20.1■□□□□ 0.81
MT-ND3P03897 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
MT-ND3P03897 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.1■□□□□ 0.81
MT-ND3P03897 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MT-ND3P03897 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
MT-ND3P03897 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.1■□□□□ 0.81
MT-ND3P03897 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MT-ND3P03897 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MT-ND3P03897 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
MT-ND3P03897 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
MT-ND3P03897 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MT-ND3P03897 TNXA-203ENST00000507684 2038 ntBASIC20.09■□□□□ 0.81
MT-ND3P03897 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MT-ND3P03897 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MT-ND3P03897 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
MT-ND3P03897 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
MT-ND3P03897 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.09■□□□□ 0.81
MT-ND3P03897 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
MT-ND3P03897 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.09■□□□□ 0.81
MT-ND3P03897 TERF1P5-201ENST00000477545 1207 ntBASIC20.09■□□□□ 0.81
MT-ND3P03897 AF201337.1-201ENST00000520239 748 ntBASIC20.09■□□□□ 0.81
MT-ND3P03897 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.09■□□□□ 0.81
MT-ND3P03897 AC133552.2-202ENST00000575694 574 ntBASIC20.09■□□□□ 0.81
MT-ND3P03897 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
MT-ND3P03897 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.09■□□□□ 0.81
MT-ND3P03897 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
MT-ND3P03897 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MT-ND3P03897 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.09■□□□□ 0.81
MT-ND3P03897 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MT-ND3P03897 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MT-ND3P03897 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MT-ND3P03897 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.09■□□□□ 0.81
MT-ND3P03897 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MT-ND3P03897 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MT-ND3P03897 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.09■□□□□ 0.81
MT-ND3P03897 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MT-ND3P03897 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
MT-ND3P03897 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
MT-ND3P03897 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MT-ND3P03897 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.08■□□□□ 0.81
MT-ND3P03897 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MT-ND3P03897 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MT-ND3P03897 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MT-ND3P03897 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MT-ND3P03897 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
MT-ND3P03897 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MT-ND3P03897 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MT-ND3P03897 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MT-ND3P03897 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.08■□□□□ 0.81
MT-ND3P03897 CNN2P6-201ENST00000439038 900 ntBASIC20.08■□□□□ 0.81
MT-ND3P03897 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.08■□□□□ 0.81
MT-ND3P03897 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.08■□□□□ 0.81
MT-ND3P03897 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.08■□□□□ 0.81
MT-ND3P03897 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.08■□□□□ 0.81
MT-ND3P03897 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.08■□□□□ 0.81
MT-ND3P03897 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.08■□□□□ 0.8
MT-ND3P03897 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.08■□□□□ 0.8
MT-ND3P03897 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MT-ND3P03897 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.08■□□□□ 0.8
MT-ND3P03897 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
MT-ND3P03897 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.08■□□□□ 0.8
MT-ND3P03897 RBM17P2-201ENST00000616397 1405 ntBASIC20.08■□□□□ 0.8
MT-ND3P03897 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
MT-ND3P03897 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms