Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MT-ND1P03886 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.64■□□□□ 0.57
MT-ND1P03886 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
MT-ND1P03886 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
MT-ND1P03886 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.64■□□□□ 0.57
MT-ND1P03886 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.64■□□□□ 0.57
MT-ND1P03886 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.64■□□□□ 0.57
MT-ND1P03886 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.64■□□□□ 0.57
MT-ND1P03886 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.64■□□□□ 0.57
MT-ND1P03886 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MT-ND1P03886 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MT-ND1P03886 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MT-ND1P03886 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
MT-ND1P03886 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MT-ND1P03886 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
MT-ND1P03886 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND1P03886 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND1P03886 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND1P03886 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND1P03886 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND1P03886 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND1P03886 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND1P03886 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND1P03886 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND1P03886 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
MT-ND1P03886 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
MT-ND1P03886 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND1P03886 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND1P03886 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND1P03886 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.63■□□□□ 0.57
MT-ND1P03886 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND1P03886 AL032819.2-201ENST00000624543 2162 ntBASIC18.63■□□□□ 0.57
MT-ND1P03886 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND1P03886 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.63■□□□□ 0.57
MT-ND1P03886 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND1P03886 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
MT-ND1P03886 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND1P03886 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-ND1P03886 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
MT-ND1P03886 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND1P03886 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND1P03886 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND1P03886 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND1P03886 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.62■□□□□ 0.57
MT-ND1P03886 AC091799.1-201ENST00000422823 811 ntBASIC18.62■□□□□ 0.57
MT-ND1P03886 ZNRF2P3-201ENST00000424200 374 ntBASIC18.62■□□□□ 0.57
MT-ND1P03886 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.62■□□□□ 0.57
MT-ND1P03886 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND1P03886 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.62■□□□□ 0.57
MT-ND1P03886 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.62■□□□□ 0.57
MT-ND1P03886 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
MT-ND1P03886 AC004854.2-201ENST00000608450 1441 ntBASIC18.62■□□□□ 0.57
MT-ND1P03886 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND1P03886 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-ND1P03886 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
MT-ND1P03886 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
MT-ND1P03886 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.62■□□□□ 0.57
MT-ND1P03886 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND1P03886 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND1P03886 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND1P03886 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND1P03886 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND1P03886 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND1P03886 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND1P03886 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND1P03886 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.61■□□□□ 0.57
MT-ND1P03886 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.61■□□□□ 0.57
MT-ND1P03886 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.61■□□□□ 0.57
MT-ND1P03886 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND1P03886 AC007322.3-201ENST00000426526 701 ntBASIC18.61■□□□□ 0.57
MT-ND1P03886 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.61■□□□□ 0.57
MT-ND1P03886 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.61■□□□□ 0.57
MT-ND1P03886 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND1P03886 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
MT-ND1P03886 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND1P03886 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND1P03886 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND1P03886 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND1P03886 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND1P03886 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-ND1P03886 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.6■□□□□ 0.57
MT-ND1P03886 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
MT-ND1P03886 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND1P03886 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND1P03886 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND1P03886 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND1P03886 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
MT-ND1P03886 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND1P03886 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND1P03886 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND1P03886 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND1P03886 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
MT-ND1P03886 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND1P03886 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.6■□□□□ 0.57
MT-ND1P03886 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.6■□□□□ 0.57
MT-ND1P03886 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.6■□□□□ 0.57
MT-ND1P03886 SLC7A5P1-201ENST00000568957 537 ntBASIC18.6■□□□□ 0.57
MT-ND1P03886 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND1P03886 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
MT-ND1P03886 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms