Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ALDH1A1P00352 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC22.72■■□□□ 1.23
ALDH1A1P00352 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC22.72■■□□□ 1.23
ALDH1A1P00352 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.72■■□□□ 1.23
ALDH1A1P00352 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
ALDH1A1P00352 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ALDH1A1P00352 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
ALDH1A1P00352 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
ALDH1A1P00352 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ALDH1A1P00352 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
ALDH1A1P00352 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ALDH1A1P00352 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.71■■□□□ 1.23
ALDH1A1P00352 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
ALDH1A1P00352 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
ALDH1A1P00352 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ALDH1A1P00352 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ALDH1A1P00352 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ALDH1A1P00352 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
ALDH1A1P00352 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
ALDH1A1P00352 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC22.71■■□□□ 1.23
ALDH1A1P00352 AL441883.1-201ENST00000566170 1045 ntBASIC22.71■■□□□ 1.23
ALDH1A1P00352 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ALDH1A1P00352 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC22.71■■□□□ 1.23
ALDH1A1P00352 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ALDH1A1P00352 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
ALDH1A1P00352 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
ALDH1A1P00352 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ALDH1A1P00352 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
ALDH1A1P00352 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
ALDH1A1P00352 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.23
ALDH1A1P00352 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.23
ALDH1A1P00352 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.7■■□□□ 1.22
ALDH1A1P00352 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ALDH1A1P00352 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ALDH1A1P00352 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
ALDH1A1P00352 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
ALDH1A1P00352 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC22.7■■□□□ 1.22
ALDH1A1P00352 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ALDH1A1P00352 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ALDH1A1P00352 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
ALDH1A1P00352 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ALDH1A1P00352 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.69■■□□□ 1.22
ALDH1A1P00352 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
ALDH1A1P00352 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ALDH1A1P00352 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ALDH1A1P00352 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.69■■□□□ 1.22
ALDH1A1P00352 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
ALDH1A1P00352 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ALDH1A1P00352 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC22.69■■□□□ 1.22
ALDH1A1P00352 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC22.69■■□□□ 1.22
ALDH1A1P00352 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ALDH1A1P00352 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
ALDH1A1P00352 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
ALDH1A1P00352 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
ALDH1A1P00352 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC22.69■■□□□ 1.22
ALDH1A1P00352 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC22.69■■□□□ 1.22
ALDH1A1P00352 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC22.69■■□□□ 1.22
ALDH1A1P00352 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC22.69■■□□□ 1.22
ALDH1A1P00352 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC22.69■■□□□ 1.22
ALDH1A1P00352 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
ALDH1A1P00352 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.69■■□□□ 1.22
ALDH1A1P00352 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ALDH1A1P00352 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
ALDH1A1P00352 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC22.68■■□□□ 1.22
ALDH1A1P00352 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.68■■□□□ 1.22
ALDH1A1P00352 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.68■■□□□ 1.22
ALDH1A1P00352 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ALDH1A1P00352 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ALDH1A1P00352 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ALDH1A1P00352 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ALDH1A1P00352 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC22.68■■□□□ 1.22
ALDH1A1P00352 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.68■■□□□ 1.22
ALDH1A1P00352 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ALDH1A1P00352 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC22.68■■□□□ 1.22
ALDH1A1P00352 CA15P1-201ENST00000481698 905 ntBASIC22.68■■□□□ 1.22
ALDH1A1P00352 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ALDH1A1P00352 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC22.68■■□□□ 1.22
ALDH1A1P00352 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC22.68■■□□□ 1.22
ALDH1A1P00352 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC22.68■■□□□ 1.22
ALDH1A1P00352 IRF5-214ENST00000613821 595 ntTSL 5 BASIC22.68■■□□□ 1.22
ALDH1A1P00352 AL023973.1-201ENST00000624619 620 ntBASIC22.68■■□□□ 1.22
ALDH1A1P00352 HLA-A-209ENST00000638375 975 ntBASIC22.68■■□□□ 1.22
ALDH1A1P00352 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.68■■□□□ 1.22
ALDH1A1P00352 AC242852.2-201ENST00000615738 1807 ntBASIC22.68■■□□□ 1.22
ALDH1A1P00352 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC22.68■■□□□ 1.22
ALDH1A1P00352 GOLGA6L3-201ENST00000507199 1679 ntBASIC22.68■■□□□ 1.22
ALDH1A1P00352 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC22.68■■□□□ 1.22
ALDH1A1P00352 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
ALDH1A1P00352 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
ALDH1A1P00352 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC22.67■■□□□ 1.22
ALDH1A1P00352 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.67■■□□□ 1.22
ALDH1A1P00352 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC22.67■■□□□ 1.22
ALDH1A1P00352 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
ALDH1A1P00352 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ALDH1A1P00352 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC22.67■■□□□ 1.22
ALDH1A1P00352 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ALDH1A1P00352 ATP5G2P1-201ENST00000433580 426 ntBASIC22.67■■□□□ 1.22
ALDH1A1P00352 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ALDH1A1P00352 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC22.67■■□□□ 1.22
ALDH1A1P00352 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms