Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AL353708.3-201ENST00000610272 989 ntBASIC22.28■■□□□ 1.16
GGPS1O95749 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
GGPS1O95749 AC116351.2-201ENST00000606540 1585 ntBASIC22.28■■□□□ 1.16
GGPS1O95749 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
GGPS1O95749 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
GGPS1O95749 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC22.28■■□□□ 1.16
GGPS1O95749 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC22.27■■□□□ 1.16
GGPS1O95749 AP006587.1-201ENST00000534129 1502 ntBASIC22.27■■□□□ 1.16
GGPS1O95749 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
GGPS1O95749 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.27■■□□□ 1.16
GGPS1O95749 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
GGPS1O95749 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
GGPS1O95749 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
GGPS1O95749 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
GGPS1O95749 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.27■■□□□ 1.16
GGPS1O95749 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC22.27■■□□□ 1.16
GGPS1O95749 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC22.27■■□□□ 1.16
GGPS1O95749 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.27■■□□□ 1.16
GGPS1O95749 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC22.27■■□□□ 1.16
GGPS1O95749 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
GGPS1O95749 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC22.27■■□□□ 1.16
GGPS1O95749 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC22.27■■□□□ 1.16
GGPS1O95749 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
GGPS1O95749 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
GGPS1O95749 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
GGPS1O95749 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
GGPS1O95749 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC22.27■■□□□ 1.16
GGPS1O95749 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
GGPS1O95749 ME2-216ENST00000639850 2331 ntTSL 5 BASIC22.26■■□□□ 1.15
GGPS1O95749 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
GGPS1O95749 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
GGPS1O95749 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
GGPS1O95749 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
GGPS1O95749 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC22.26■■□□□ 1.15
GGPS1O95749 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
GGPS1O95749 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
GGPS1O95749 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC22.26■■□□□ 1.15
GGPS1O95749 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
GGPS1O95749 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC22.26■■□□□ 1.15
GGPS1O95749 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
GGPS1O95749 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC22.26■■□□□ 1.15
GGPS1O95749 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC22.26■■□□□ 1.15
GGPS1O95749 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC22.26■■□□□ 1.15
GGPS1O95749 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC22.26■■□□□ 1.15
GGPS1O95749 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.26■■□□□ 1.15
GGPS1O95749 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
GGPS1O95749 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC22.26■■□□□ 1.15
GGPS1O95749 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
GGPS1O95749 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
GGPS1O95749 TFP1-202ENST00000475455 1573 ntBASIC22.25■■□□□ 1.15
GGPS1O95749 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
GGPS1O95749 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
GGPS1O95749 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
GGPS1O95749 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
GGPS1O95749 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC22.25■■□□□ 1.15
GGPS1O95749 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC22.25■■□□□ 1.15
GGPS1O95749 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC22.25■■□□□ 1.15
GGPS1O95749 AC133561.5-201ENST00000635547 218 ntBASIC22.25■■□□□ 1.15
GGPS1O95749 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
GGPS1O95749 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC22.25■■□□□ 1.15
GGPS1O95749 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
GGPS1O95749 AC018553.1-201ENST00000616682 1458 ntBASIC22.25■■□□□ 1.15
GGPS1O95749 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
GGPS1O95749 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.25■■□□□ 1.15
GGPS1O95749 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
GGPS1O95749 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
GGPS1O95749 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
GGPS1O95749 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
GGPS1O95749 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
GGPS1O95749 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC22.24■■□□□ 1.15
GGPS1O95749 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
GGPS1O95749 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
GGPS1O95749 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC22.24■■□□□ 1.15
GGPS1O95749 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
GGPS1O95749 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
GGPS1O95749 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC22.24■■□□□ 1.15
GGPS1O95749 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
GGPS1O95749 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC22.24■■□□□ 1.15
GGPS1O95749 DECR2-212ENST00000627716 352 ntTSL 2 BASIC22.24■■□□□ 1.15
GGPS1O95749 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC22.24■■□□□ 1.15
GGPS1O95749 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC22.24■■□□□ 1.15
GGPS1O95749 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
GGPS1O95749 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
GGPS1O95749 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
GGPS1O95749 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
GGPS1O95749 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC22.24■■□□□ 1.15
GGPS1O95749 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
GGPS1O95749 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC22.23■■□□□ 1.15
GGPS1O95749 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
GGPS1O95749 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
GGPS1O95749 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC22.23■■□□□ 1.15
GGPS1O95749 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
GGPS1O95749 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
GGPS1O95749 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
GGPS1O95749 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
GGPS1O95749 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
GGPS1O95749 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
GGPS1O95749 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
GGPS1O95749 NIFKP9-201ENST00000419265 221 ntBASIC22.23■■□□□ 1.15
GGPS1O95749 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms