Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEF1O95521 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEF1O95521 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.73■□□□□ 0.75
PRAMEF1O95521 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEF1O95521 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEF1O95521 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PRAMEF1O95521 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PRAMEF1O95521 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.72■□□□□ 0.75
PRAMEF1O95521 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRAMEF1O95521 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.72■□□□□ 0.75
PRAMEF1O95521 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRAMEF1O95521 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PRAMEF1O95521 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.72■□□□□ 0.75
PRAMEF1O95521 AC026366.1-201ENST00000488803 879 ntBASIC19.72■□□□□ 0.75
PRAMEF1O95521 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.72■□□□□ 0.75
PRAMEF1O95521 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PRAMEF1O95521 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRAMEF1O95521 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.72■□□□□ 0.75
PRAMEF1O95521 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
PRAMEF1O95521 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PRAMEF1O95521 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.72■□□□□ 0.75
PRAMEF1O95521 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PRAMEF1O95521 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.72■□□□□ 0.75
PRAMEF1O95521 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PRAMEF1O95521 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.72■□□□□ 0.75
PRAMEF1O95521 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRAMEF1O95521 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PRAMEF1O95521 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PRAMEF1O95521 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEF1O95521 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.71■□□□□ 0.75
PRAMEF1O95521 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEF1O95521 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEF1O95521 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.71■□□□□ 0.75
PRAMEF1O95521 AP001271.2-201ENST00000624018 1556 ntBASIC19.71■□□□□ 0.75
PRAMEF1O95521 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEF1O95521 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEF1O95521 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEF1O95521 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.71■□□□□ 0.75
PRAMEF1O95521 MIR4651-201ENST00000582622 73 ntBASIC19.71■□□□□ 0.75
PRAMEF1O95521 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PRAMEF1O95521 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
PRAMEF1O95521 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.71■□□□□ 0.75
PRAMEF1O95521 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEF1O95521 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PRAMEF1O95521 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PRAMEF1O95521 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEF1O95521 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.71■□□□□ 0.75
PRAMEF1O95521 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF1O95521 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF1O95521 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.7■□□□□ 0.74
PRAMEF1O95521 AC116351.2-201ENST00000606540 1585 ntBASIC19.7■□□□□ 0.74
PRAMEF1O95521 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF1O95521 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF1O95521 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
PRAMEF1O95521 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PRAMEF1O95521 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF1O95521 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF1O95521 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF1O95521 ESRRAP1-201ENST00000400596 1257 ntBASIC19.7■□□□□ 0.74
PRAMEF1O95521 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.7■□□□□ 0.74
PRAMEF1O95521 POM121L13P-201ENST00000422362 380 ntBASIC19.7■□□□□ 0.74
PRAMEF1O95521 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF1O95521 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF1O95521 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.7■□□□□ 0.74
PRAMEF1O95521 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.7■□□□□ 0.74
PRAMEF1O95521 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.7■□□□□ 0.74
PRAMEF1O95521 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PRAMEF1O95521 AC018553.1-201ENST00000616682 1458 ntBASIC19.7■□□□□ 0.74
PRAMEF1O95521 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF1O95521 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF1O95521 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF1O95521 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.7■□□□□ 0.74
PRAMEF1O95521 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PRAMEF1O95521 TMEM179-206ENST00000616017 1645 ntBASIC19.69■□□□□ 0.74
PRAMEF1O95521 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PRAMEF1O95521 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.69■□□□□ 0.74
PRAMEF1O95521 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.69■□□□□ 0.74
PRAMEF1O95521 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.69■□□□□ 0.74
PRAMEF1O95521 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF1O95521 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.69■□□□□ 0.74
PRAMEF1O95521 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
PRAMEF1O95521 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.69■□□□□ 0.74
PRAMEF1O95521 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF1O95521 AL121906.2-201ENST00000621597 723 ntBASIC19.69■□□□□ 0.74
PRAMEF1O95521 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.69■□□□□ 0.74
PRAMEF1O95521 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF1O95521 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF1O95521 AC009237.14-201ENST00000609975 1594 ntBASIC19.69■□□□□ 0.74
PRAMEF1O95521 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.69■□□□□ 0.74
PRAMEF1O95521 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF1O95521 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.69■□□□□ 0.74
PRAMEF1O95521 AFG3L1P-217ENST00000557444 2447 ntBASIC19.68■□□□□ 0.74
PRAMEF1O95521 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEF1O95521 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.68■□□□□ 0.74
PRAMEF1O95521 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.68■□□□□ 0.74
PRAMEF1O95521 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PRAMEF1O95521 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEF1O95521 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.68■□□□□ 0.74
PRAMEF1O95521 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEF1O95521 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms