Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTN3O95197 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTN3O95197 NBPF21P-201ENST00000425093 1451 ntBASIC20.87■□□□□ 0.93
RTN3O95197 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.87■□□□□ 0.93
RTN3O95197 SMG8-203ENST00000578922 2178 ntBASIC20.86■□□□□ 0.93
RTN3O95197 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.86■□□□□ 0.93
RTN3O95197 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RTN3O95197 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RTN3O95197 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RTN3O95197 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.86■□□□□ 0.93
RTN3O95197 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RTN3O95197 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.86■□□□□ 0.93
RTN3O95197 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.86■□□□□ 0.93
RTN3O95197 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTN3O95197 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTN3O95197 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTN3O95197 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.85■□□□□ 0.93
RTN3O95197 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTN3O95197 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTN3O95197 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTN3O95197 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
RTN3O95197 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTN3O95197 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTN3O95197 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTN3O95197 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTN3O95197 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.85■□□□□ 0.93
RTN3O95197 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.85■□□□□ 0.93
RTN3O95197 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTN3O95197 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTN3O95197 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.85■□□□□ 0.93
RTN3O95197 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.85■□□□□ 0.93
RTN3O95197 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.85■□□□□ 0.93
RTN3O95197 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTN3O95197 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.85■□□□□ 0.93
RTN3O95197 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTN3O95197 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTN3O95197 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTN3O95197 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.84■□□□□ 0.93
RTN3O95197 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTN3O95197 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTN3O95197 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.84■□□□□ 0.93
RTN3O95197 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.84■□□□□ 0.93
RTN3O95197 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.84■□□□□ 0.93
RTN3O95197 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTN3O95197 AL135905.2-201ENST00000584934 1404 ntBASIC20.84■□□□□ 0.93
RTN3O95197 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTN3O95197 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTN3O95197 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTN3O95197 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTN3O95197 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTN3O95197 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RTN3O95197 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
RTN3O95197 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTN3O95197 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTN3O95197 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RTN3O95197 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.83■□□□□ 0.93
RTN3O95197 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
RTN3O95197 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTN3O95197 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTN3O95197 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
RTN3O95197 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.83■□□□□ 0.93
RTN3O95197 AC012618.2-201ENST00000428058 849 ntBASIC20.83■□□□□ 0.93
RTN3O95197 KRT16P5-201ENST00000455284 522 ntBASIC20.83■□□□□ 0.93
RTN3O95197 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.83■□□□□ 0.93
RTN3O95197 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RTN3O95197 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTN3O95197 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
RTN3O95197 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.83■□□□□ 0.92
RTN3O95197 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTN3O95197 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTN3O95197 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.82■□□□□ 0.92
RTN3O95197 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTN3O95197 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.82■□□□□ 0.92
RTN3O95197 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.82■□□□□ 0.92
RTN3O95197 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTN3O95197 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.82■□□□□ 0.92
RTN3O95197 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RTN3O95197 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTN3O95197 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RTN3O95197 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
RTN3O95197 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.82■□□□□ 0.92
RTN3O95197 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTN3O95197 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.82■□□□□ 0.92
RTN3O95197 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.82■□□□□ 0.92
RTN3O95197 RARRES2P10-201ENST00000564312 460 ntBASIC20.82■□□□□ 0.92
RTN3O95197 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.82■□□□□ 0.92
RTN3O95197 Z99916.2-201ENST00000604037 246 ntBASIC20.82■□□□□ 0.92
RTN3O95197 AC004264.1-201ENST00000608354 794 ntBASIC20.82■□□□□ 0.92
RTN3O95197 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RTN3O95197 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.82■□□□□ 0.92
RTN3O95197 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RTN3O95197 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
RTN3O95197 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RTN3O95197 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.82■□□□□ 0.92
RTN3O95197 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.82■□□□□ 0.92
RTN3O95197 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN3O95197 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.81■□□□□ 0.92
RTN3O95197 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTN3O95197 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
RTN3O95197 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms