Protein–RNA interactions for Protein: O94911

ABCA8, ATP-binding cassette sub-family A member 8, humanhuman

Predictions only

Length 1,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8O94911 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
ABCA8O94911 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
ABCA8O94911 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
ABCA8O94911 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
ABCA8O94911 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
ABCA8O94911 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
ABCA8O94911 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC31.05■■■□□ 2.56
ABCA8O94911 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC31.05■■■□□ 2.56
ABCA8O94911 AC116407.4-201ENST00000623319 1061 ntBASIC31.05■■■□□ 2.56
ABCA8O94911 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
ABCA8O94911 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC31.04■■■□□ 2.56
ABCA8O94911 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
ABCA8O94911 PCED1CP-201ENST00000419887 785 ntBASIC31.04■■■□□ 2.56
ABCA8O94911 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
ABCA8O94911 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
ABCA8O94911 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC31.04■■■□□ 2.56
ABCA8O94911 CD320-202ENST00000537716 1119 ntTSL 2 BASIC31.04■■■□□ 2.56
ABCA8O94911 GPX4-207ENST00000589115 812 ntTSL 2 BASIC31.04■■■□□ 2.56
ABCA8O94911 CYGB-204ENST00000589342 815 ntTSL 3 BASIC31.04■■■□□ 2.56
ABCA8O94911 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
ABCA8O94911 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC31.03■■■□□ 2.56
ABCA8O94911 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC31.03■■■□□ 2.56
ABCA8O94911 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
ABCA8O94911 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
ABCA8O94911 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC31.03■■■□□ 2.56
ABCA8O94911 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
ABCA8O94911 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC31.03■■■□□ 2.56
ABCA8O94911 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
ABCA8O94911 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC31.03■■■□□ 2.56
ABCA8O94911 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC31.03■■■□□ 2.56
ABCA8O94911 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC31.02■■■□□ 2.56
ABCA8O94911 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
ABCA8O94911 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC31.02■■■□□ 2.56
ABCA8O94911 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC31.02■■■□□ 2.56
ABCA8O94911 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC31.02■■■□□ 2.56
ABCA8O94911 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC31.02■■■□□ 2.56
ABCA8O94911 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC31.02■■■□□ 2.56
ABCA8O94911 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
ABCA8O94911 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
ABCA8O94911 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
ABCA8O94911 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC31.01■■■□□ 2.56
ABCA8O94911 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC31.01■■■□□ 2.56
ABCA8O94911 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
ABCA8O94911 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.56
ABCA8O94911 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC31.01■■■□□ 2.56
ABCA8O94911 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC31.01■■■□□ 2.55
ABCA8O94911 AC005332.1-201ENST00000577698 1310 ntBASIC31.01■■■□□ 2.55
ABCA8O94911 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
ABCA8O94911 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC31.01■■■□□ 2.55
ABCA8O94911 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
ABCA8O94911 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC31.01■■■□□ 2.55
ABCA8O94911 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
ABCA8O94911 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
ABCA8O94911 GXYLT1P6-201ENST00000456472 1187 ntBASIC31■■■□□ 2.55
ABCA8O94911 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC31■■■□□ 2.55
ABCA8O94911 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC31■■■□□ 2.55
ABCA8O94911 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC31■■■□□ 2.55
ABCA8O94911 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC31■■■□□ 2.55
ABCA8O94911 AC083849.1-201ENST00000615227 514 ntBASIC31■■■□□ 2.55
ABCA8O94911 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC31■■■□□ 2.55
ABCA8O94911 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC31■■■□□ 2.55
ABCA8O94911 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
ABCA8O94911 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC31■■■□□ 2.55
ABCA8O94911 AL359075.1-203ENST00000462729 1002 ntBASIC31■■■□□ 2.55
ABCA8O94911 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC31■■■□□ 2.55
ABCA8O94911 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
ABCA8O94911 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
ABCA8O94911 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
ABCA8O94911 AC092647.4-201ENST00000457211 535 ntBASIC30.99■■■□□ 2.55
ABCA8O94911 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC30.99■■■□□ 2.55
ABCA8O94911 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC30.99■■■□□ 2.55
ABCA8O94911 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC30.99■■■□□ 2.55
ABCA8O94911 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
ABCA8O94911 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC30.99■■■□□ 2.55
ABCA8O94911 IER3-202ENST00000376377 1350 ntBASIC30.99■■■□□ 2.55
ABCA8O94911 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC30.99■■■□□ 2.55
ABCA8O94911 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
ABCA8O94911 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC30.99■■■□□ 2.55
ABCA8O94911 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
ABCA8O94911 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
ABCA8O94911 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
ABCA8O94911 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC30.98■■■□□ 2.55
ABCA8O94911 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
ABCA8O94911 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC30.98■■■□□ 2.55
ABCA8O94911 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
ABCA8O94911 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
ABCA8O94911 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC30.98■■■□□ 2.55
ABCA8O94911 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC30.98■■■□□ 2.55
ABCA8O94911 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
ABCA8O94911 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC30.98■■■□□ 2.55
ABCA8O94911 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC30.98■■■□□ 2.55
ABCA8O94911 DPP3P2-201ENST00000416030 1696 ntBASIC30.98■■■□□ 2.55
ABCA8O94911 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC30.98■■■□□ 2.55
ABCA8O94911 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
ABCA8O94911 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
ABCA8O94911 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
ABCA8O94911 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC30.97■■■□□ 2.55
ABCA8O94911 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC30.97■■■□□ 2.55
ABCA8O94911 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC30.97■■■□□ 2.55
ABCA8O94911 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC30.97■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms