Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDUFS3O75489 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDUFS3O75489 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
NDUFS3O75489 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.74■□□□□ 0.75
NDUFS3O75489 AL138781.1-201ENST00000566567 1274 ntBASIC19.74■□□□□ 0.75
NDUFS3O75489 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.74■□□□□ 0.75
NDUFS3O75489 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.74■□□□□ 0.75
NDUFS3O75489 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.74■□□□□ 0.75
NDUFS3O75489 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NDUFS3O75489 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.74■□□□□ 0.75
NDUFS3O75489 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.74■□□□□ 0.75
NDUFS3O75489 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
NDUFS3O75489 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDUFS3O75489 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.73■□□□□ 0.75
NDUFS3O75489 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NDUFS3O75489 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDUFS3O75489 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NDUFS3O75489 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDUFS3O75489 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDUFS3O75489 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.73■□□□□ 0.75
NDUFS3O75489 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDUFS3O75489 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.73■□□□□ 0.75
NDUFS3O75489 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
NDUFS3O75489 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.73■□□□□ 0.75
NDUFS3O75489 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDUFS3O75489 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDUFS3O75489 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.73■□□□□ 0.75
NDUFS3O75489 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDUFS3O75489 AC009237.14-201ENST00000609975 1594 ntBASIC19.73■□□□□ 0.75
NDUFS3O75489 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NDUFS3O75489 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NDUFS3O75489 PHGDH-210ENST00000641115 1638 ntBASIC19.73■□□□□ 0.75
NDUFS3O75489 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDUFS3O75489 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
NDUFS3O75489 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDUFS3O75489 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.72■□□□□ 0.75
NDUFS3O75489 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NDUFS3O75489 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDUFS3O75489 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDUFS3O75489 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDUFS3O75489 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDUFS3O75489 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
NDUFS3O75489 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDUFS3O75489 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDUFS3O75489 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDUFS3O75489 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDUFS3O75489 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDUFS3O75489 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.72■□□□□ 0.75
NDUFS3O75489 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.72■□□□□ 0.75
NDUFS3O75489 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.72■□□□□ 0.75
NDUFS3O75489 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.72■□□□□ 0.75
NDUFS3O75489 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NDUFS3O75489 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NDUFS3O75489 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.72■□□□□ 0.75
NDUFS3O75489 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NDUFS3O75489 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDUFS3O75489 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
NDUFS3O75489 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDUFS3O75489 AP001271.2-201ENST00000624018 1556 ntBASIC19.71■□□□□ 0.75
NDUFS3O75489 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDUFS3O75489 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDUFS3O75489 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
NDUFS3O75489 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDUFS3O75489 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.71■□□□□ 0.75
NDUFS3O75489 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NDUFS3O75489 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.71■□□□□ 0.75
NDUFS3O75489 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.71■□□□□ 0.75
NDUFS3O75489 AC005829.2-201ENST00000571422 1056 ntBASIC19.71■□□□□ 0.75
NDUFS3O75489 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.71■□□□□ 0.75
NDUFS3O75489 AC104771.1-201ENST00000603335 964 ntBASIC19.71■□□□□ 0.75
NDUFS3O75489 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
NDUFS3O75489 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDUFS3O75489 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDUFS3O75489 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDUFS3O75489 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
NDUFS3O75489 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
NDUFS3O75489 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NDUFS3O75489 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NDUFS3O75489 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
NDUFS3O75489 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDUFS3O75489 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NDUFS3O75489 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
NDUFS3O75489 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NDUFS3O75489 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.7■□□□□ 0.74
NDUFS3O75489 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NDUFS3O75489 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
NDUFS3O75489 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NDUFS3O75489 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.7■□□□□ 0.74
NDUFS3O75489 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.7■□□□□ 0.74
NDUFS3O75489 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.7■□□□□ 0.74
NDUFS3O75489 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.7■□□□□ 0.74
NDUFS3O75489 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NDUFS3O75489 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.7■□□□□ 0.74
NDUFS3O75489 MYC-209ENST00000641252 345 ntBASIC19.7■□□□□ 0.74
NDUFS3O75489 AC133041.1-202ENST00000642053 222 ntBASIC19.7■□□□□ 0.74
NDUFS3O75489 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NDUFS3O75489 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
NDUFS3O75489 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NDUFS3O75489 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
NDUFS3O75489 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms