Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT3O75175 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
CNOT3O75175 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT3O75175 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT3O75175 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.15■□□□□ 0.66
CNOT3O75175 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT3O75175 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT3O75175 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT3O75175 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
CNOT3O75175 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT3O75175 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CNOT3O75175 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNOT3O75175 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CNOT3O75175 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CNOT3O75175 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT3O75175 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT3O75175 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
CNOT3O75175 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.14■□□□□ 0.65
CNOT3O75175 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT3O75175 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT3O75175 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT3O75175 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.14■□□□□ 0.65
CNOT3O75175 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
CNOT3O75175 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.14■□□□□ 0.65
CNOT3O75175 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.14■□□□□ 0.65
CNOT3O75175 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT3O75175 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.14■□□□□ 0.65
CNOT3O75175 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT3O75175 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CNOT3O75175 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT3O75175 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CNOT3O75175 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT3O75175 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT3O75175 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT3O75175 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT3O75175 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNOT3O75175 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT3O75175 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT3O75175 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT3O75175 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT3O75175 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT3O75175 AL158047.1-201ENST00000445918 881 ntBASIC19.13■□□□□ 0.65
CNOT3O75175 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT3O75175 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CNOT3O75175 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.13■□□□□ 0.65
CNOT3O75175 AC142381.4-202ENST00000563973 229 ntBASIC19.13■□□□□ 0.65
CNOT3O75175 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CNOT3O75175 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT3O75175 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT3O75175 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT3O75175 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT3O75175 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT3O75175 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.13■□□□□ 0.65
CNOT3O75175 GABARAPL3-202ENST00000624044 1851 ntBASIC19.13■□□□□ 0.65
CNOT3O75175 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT3O75175 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT3O75175 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.12■□□□□ 0.65
CNOT3O75175 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT3O75175 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT3O75175 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT3O75175 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT3O75175 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT3O75175 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT3O75175 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT3O75175 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.12■□□□□ 0.65
CNOT3O75175 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT3O75175 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.12■□□□□ 0.65
CNOT3O75175 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.12■□□□□ 0.65
CNOT3O75175 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT3O75175 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT3O75175 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.12■□□□□ 0.65
CNOT3O75175 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT3O75175 PGM5P4-201ENST00000421970 445 ntBASIC19.12■□□□□ 0.65
CNOT3O75175 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.12■□□□□ 0.65
CNOT3O75175 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CNOT3O75175 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CNOT3O75175 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.12■□□□□ 0.65
CNOT3O75175 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CNOT3O75175 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT3O75175 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
CNOT3O75175 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.12■□□□□ 0.65
CNOT3O75175 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT3O75175 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.11■□□□□ 0.65
CNOT3O75175 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT3O75175 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT3O75175 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT3O75175 AC027702.1-201ENST00000563810 1770 ntBASIC19.11■□□□□ 0.65
CNOT3O75175 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT3O75175 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.11■□□□□ 0.65
CNOT3O75175 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT3O75175 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.11■□□□□ 0.65
CNOT3O75175 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT3O75175 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT3O75175 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.11■□□□□ 0.65
CNOT3O75175 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.11■□□□□ 0.65
CNOT3O75175 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.11■□□□□ 0.65
CNOT3O75175 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.11■□□□□ 0.65
CNOT3O75175 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.11■□□□□ 0.65
CNOT3O75175 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT3O75175 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms