Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AP006587.1-201ENST00000534129 1502 ntBASIC19.36■□□□□ 0.69
GFRA3O60609 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GFRA3O60609 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
GFRA3O60609 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
GFRA3O60609 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.36■□□□□ 0.69
GFRA3O60609 YBX1P10-201ENST00000444752 975 ntBASIC19.36■□□□□ 0.69
GFRA3O60609 BX276092.5-203ENST00000456199 560 ntBASIC19.36■□□□□ 0.69
GFRA3O60609 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.36■□□□□ 0.69
GFRA3O60609 AC091304.2-201ENST00000564639 760 ntBASIC19.36■□□□□ 0.69
GFRA3O60609 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.36■□□□□ 0.69
GFRA3O60609 AL121672.3-201ENST00000608644 468 ntBASIC19.36■□□□□ 0.69
GFRA3O60609 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.36■□□□□ 0.69
GFRA3O60609 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.36■□□□□ 0.69
GFRA3O60609 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GFRA3O60609 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
GFRA3O60609 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GFRA3O60609 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GFRA3O60609 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GFRA3O60609 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GFRA3O60609 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GFRA3O60609 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
GFRA3O60609 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.35■□□□□ 0.69
GFRA3O60609 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
GFRA3O60609 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GFRA3O60609 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GFRA3O60609 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
GFRA3O60609 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.35■□□□□ 0.69
GFRA3O60609 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GFRA3O60609 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.35■□□□□ 0.69
GFRA3O60609 AL121772.3-201ENST00000610840 674 ntBASIC19.35■□□□□ 0.69
GFRA3O60609 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
GFRA3O60609 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GFRA3O60609 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.35■□□□□ 0.69
GFRA3O60609 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.34■□□□□ 0.69
GFRA3O60609 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GFRA3O60609 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GFRA3O60609 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
GFRA3O60609 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GFRA3O60609 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.34■□□□□ 0.69
GFRA3O60609 HLA-G-202ENST00000376815 851 ntBASIC19.34■□□□□ 0.69
GFRA3O60609 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.34■□□□□ 0.69
GFRA3O60609 MRPL3P1-201ENST00000400109 1033 ntBASIC19.34■□□□□ 0.69
GFRA3O60609 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GFRA3O60609 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.34■□□□□ 0.69
GFRA3O60609 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.34■□□□□ 0.69
GFRA3O60609 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.34■□□□□ 0.69
GFRA3O60609 SPDYE13P-201ENST00000445314 798 ntBASIC19.34■□□□□ 0.69
GFRA3O60609 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GFRA3O60609 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.34■□□□□ 0.69
GFRA3O60609 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.34■□□□□ 0.69
GFRA3O60609 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GFRA3O60609 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.34■□□□□ 0.69
GFRA3O60609 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.34■□□□□ 0.69
GFRA3O60609 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
GFRA3O60609 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
GFRA3O60609 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
GFRA3O60609 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
GFRA3O60609 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GFRA3O60609 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
GFRA3O60609 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
GFRA3O60609 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
GFRA3O60609 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.33■□□□□ 0.68
GFRA3O60609 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
GFRA3O60609 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GFRA3O60609 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
GFRA3O60609 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
GFRA3O60609 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.33■□□□□ 0.68
GFRA3O60609 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.33■□□□□ 0.68
GFRA3O60609 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
GFRA3O60609 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
GFRA3O60609 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.33■□□□□ 0.68
GFRA3O60609 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GFRA3O60609 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.33■□□□□ 0.68
GFRA3O60609 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.33■□□□□ 0.68
GFRA3O60609 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GFRA3O60609 HLA-A-201ENST00000376802 1334 ntBASIC19.32■□□□□ 0.68
GFRA3O60609 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GFRA3O60609 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.32■□□□□ 0.68
GFRA3O60609 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GFRA3O60609 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
GFRA3O60609 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
GFRA3O60609 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.32■□□□□ 0.68
GFRA3O60609 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GFRA3O60609 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GFRA3O60609 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
GFRA3O60609 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
GFRA3O60609 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.32■□□□□ 0.68
GFRA3O60609 AL139424.1-201ENST00000607572 797 ntBASIC19.32■□□□□ 0.68
GFRA3O60609 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.32■□□□□ 0.68
GFRA3O60609 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GFRA3O60609 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GFRA3O60609 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GFRA3O60609 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GFRA3O60609 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
GFRA3O60609 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GFRA3O60609 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GFRA3O60609 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GFRA3O60609 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GFRA3O60609 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GFRA3O60609 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms