Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PLOD3O60568 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.64■□□□□ 0.57
PLOD3O60568 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PLOD3O60568 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PLOD3O60568 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.64■□□□□ 0.57
PLOD3O60568 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PLOD3O60568 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PLOD3O60568 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PLOD3O60568 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PLOD3O60568 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.63■□□□□ 0.57
PLOD3O60568 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PLOD3O60568 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PLOD3O60568 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PLOD3O60568 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.63■□□□□ 0.57
PLOD3O60568 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.63■□□□□ 0.57
PLOD3O60568 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PLOD3O60568 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PLOD3O60568 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.63■□□□□ 0.57
PLOD3O60568 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PLOD3O60568 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PLOD3O60568 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.63■□□□□ 0.57
PLOD3O60568 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
PLOD3O60568 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PLOD3O60568 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PLOD3O60568 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PLOD3O60568 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PLOD3O60568 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.63■□□□□ 0.57
PLOD3O60568 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PLOD3O60568 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PLOD3O60568 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PLOD3O60568 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PLOD3O60568 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PLOD3O60568 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PLOD3O60568 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PLOD3O60568 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PLOD3O60568 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PLOD3O60568 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.62■□□□□ 0.57
PLOD3O60568 HLA-L-209ENST00000420110 1011 ntBASIC18.62■□□□□ 0.57
PLOD3O60568 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.62■□□□□ 0.57
PLOD3O60568 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PLOD3O60568 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.62■□□□□ 0.57
PLOD3O60568 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.62■□□□□ 0.57
PLOD3O60568 AC098934.4-201ENST00000564127 592 ntBASIC18.62■□□□□ 0.57
PLOD3O60568 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.62■□□□□ 0.57
PLOD3O60568 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PLOD3O60568 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PLOD3O60568 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.62■□□□□ 0.57
PLOD3O60568 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PLOD3O60568 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PLOD3O60568 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PLOD3O60568 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PLOD3O60568 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PLOD3O60568 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.62■□□□□ 0.57
PLOD3O60568 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PLOD3O60568 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PLOD3O60568 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PLOD3O60568 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PLOD3O60568 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
PLOD3O60568 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PLOD3O60568 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PLOD3O60568 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PLOD3O60568 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PLOD3O60568 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PLOD3O60568 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.61■□□□□ 0.57
PLOD3O60568 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PLOD3O60568 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.61■□□□□ 0.57
PLOD3O60568 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PLOD3O60568 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PLOD3O60568 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PLOD3O60568 ID1-201ENST00000376105 1233 ntBASIC18.61■□□□□ 0.57
PLOD3O60568 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PLOD3O60568 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
PLOD3O60568 AC005829.2-201ENST00000571422 1056 ntBASIC18.61■□□□□ 0.57
PLOD3O60568 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.61■□□□□ 0.57
PLOD3O60568 HLA-B-256ENST00000639848 1089 ntBASIC18.61■□□□□ 0.57
PLOD3O60568 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
PLOD3O60568 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.61■□□□□ 0.57
PLOD3O60568 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.61■□□□□ 0.57
PLOD3O60568 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.61■□□□□ 0.57
PLOD3O60568 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PLOD3O60568 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PLOD3O60568 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PLOD3O60568 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PLOD3O60568 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PLOD3O60568 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PLOD3O60568 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PLOD3O60568 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PLOD3O60568 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PLOD3O60568 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.6■□□□□ 0.57
PLOD3O60568 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PLOD3O60568 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PLOD3O60568 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PLOD3O60568 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.6■□□□□ 0.57
PLOD3O60568 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PLOD3O60568 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PLOD3O60568 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PLOD3O60568 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.6■□□□□ 0.57
PLOD3O60568 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PLOD3O60568 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PLOD3O60568 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms