Protein–RNA interactions for Protein: O15230

LAMA5, Laminin subunit alpha-5, humanhuman

Predictions only

Length 3,695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5O15230 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LAMA5O15230 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LAMA5O15230 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LAMA5O15230 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LAMA5O15230 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LAMA5O15230 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LAMA5O15230 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LAMA5O15230 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.48■□□□□ 0.55
LAMA5O15230 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.48■□□□□ 0.55
LAMA5O15230 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LAMA5O15230 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LAMA5O15230 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
LAMA5O15230 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LAMA5O15230 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.48■□□□□ 0.55
LAMA5O15230 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LAMA5O15230 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.48■□□□□ 0.55
LAMA5O15230 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LAMA5O15230 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LAMA5O15230 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.47■□□□□ 0.55
LAMA5O15230 AC008040.2-201ENST00000461049 708 ntBASIC18.47■□□□□ 0.55
LAMA5O15230 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.47■□□□□ 0.55
LAMA5O15230 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LAMA5O15230 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.47■□□□□ 0.55
LAMA5O15230 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.47■□□□□ 0.55
LAMA5O15230 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LAMA5O15230 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.47■□□□□ 0.55
LAMA5O15230 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.47■□□□□ 0.55
LAMA5O15230 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LAMA5O15230 UNC93B7-201ENST00000509439 705 ntBASIC18.47■□□□□ 0.55
LAMA5O15230 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.47■□□□□ 0.55
LAMA5O15230 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
LAMA5O15230 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.47■□□□□ 0.55
LAMA5O15230 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LAMA5O15230 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LAMA5O15230 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LAMA5O15230 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.47■□□□□ 0.55
LAMA5O15230 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.47■□□□□ 0.55
LAMA5O15230 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.47■□□□□ 0.55
LAMA5O15230 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.47■□□□□ 0.55
LAMA5O15230 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.47■□□□□ 0.55
LAMA5O15230 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LAMA5O15230 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.47■□□□□ 0.55
LAMA5O15230 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.47■□□□□ 0.55
LAMA5O15230 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.47■□□□□ 0.55
LAMA5O15230 CCR12P-201ENST00000446203 998 ntBASIC18.46■□□□□ 0.55
LAMA5O15230 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LAMA5O15230 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LAMA5O15230 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.46■□□□□ 0.55
LAMA5O15230 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LAMA5O15230 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LAMA5O15230 YBX1P10-201ENST00000444752 975 ntBASIC18.46■□□□□ 0.55
LAMA5O15230 VENTXP5-201ENST00000523979 775 ntBASIC18.46■□□□□ 0.55
LAMA5O15230 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
LAMA5O15230 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LAMA5O15230 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.46■□□□□ 0.55
LAMA5O15230 MIR3180-1-201ENST00000580374 94 ntBASIC18.46■□□□□ 0.55
LAMA5O15230 MIR3180-3-201ENST00000584616 94 ntBASIC18.46■□□□□ 0.55
LAMA5O15230 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.46■□□□□ 0.55
LAMA5O15230 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LAMA5O15230 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LAMA5O15230 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.46■□□□□ 0.55
LAMA5O15230 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LAMA5O15230 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LAMA5O15230 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LAMA5O15230 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LAMA5O15230 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.46■□□□□ 0.54
LAMA5O15230 AC011484.1-201ENST00000377652 1995 ntBASIC18.46■□□□□ 0.54
LAMA5O15230 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
LAMA5O15230 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LAMA5O15230 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.45■□□□□ 0.54
LAMA5O15230 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.45■□□□□ 0.54
LAMA5O15230 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.45■□□□□ 0.54
LAMA5O15230 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.45■□□□□ 0.54
LAMA5O15230 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.45■□□□□ 0.54
LAMA5O15230 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LAMA5O15230 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LAMA5O15230 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LAMA5O15230 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LAMA5O15230 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.45■□□□□ 0.54
LAMA5O15230 EMBP1-201ENST00000458200 901 ntBASIC18.45■□□□□ 0.54
LAMA5O15230 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
LAMA5O15230 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LAMA5O15230 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LAMA5O15230 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
LAMA5O15230 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LAMA5O15230 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
LAMA5O15230 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LAMA5O15230 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.45■□□□□ 0.54
LAMA5O15230 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LAMA5O15230 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LAMA5O15230 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.44■□□□□ 0.54
LAMA5O15230 AC011506.1-201ENST00000474329 610 ntBASIC18.44■□□□□ 0.54
LAMA5O15230 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.44■□□□□ 0.54
LAMA5O15230 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.44■□□□□ 0.54
LAMA5O15230 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LAMA5O15230 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.44■□□□□ 0.54
LAMA5O15230 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
LAMA5O15230 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LAMA5O15230 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LAMA5O15230 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms