Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH17O14917 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDH17O14917 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDH17O14917 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH17O14917 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDH17O14917 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH17O14917 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PCDH17O14917 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDH17O14917 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH17O14917 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDH17O14917 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDH17O14917 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH17O14917 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDH17O14917 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH17O14917 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
PCDH17O14917 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
PCDH17O14917 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH17O14917 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PCDH17O14917 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH17O14917 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH17O14917 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDH17O14917 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
PCDH17O14917 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.89■□□□□ 0.61
PCDH17O14917 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH17O14917 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.89■□□□□ 0.61
PCDH17O14917 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH17O14917 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH17O14917 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
PCDH17O14917 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PCDH17O14917 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCDH17O14917 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH17O14917 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH17O14917 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH17O14917 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCDH17O14917 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDH17O14917 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH17O14917 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH17O14917 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH17O14917 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH17O14917 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.88■□□□□ 0.61
PCDH17O14917 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PCDH17O14917 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH17O14917 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH17O14917 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH17O14917 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH17O14917 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH17O14917 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDH17O14917 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH17O14917 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH17O14917 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDH17O14917 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH17O14917 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH17O14917 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH17O14917 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH17O14917 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH17O14917 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
PCDH17O14917 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH17O14917 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDH17O14917 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH17O14917 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH17O14917 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH17O14917 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PCDH17O14917 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH17O14917 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
PCDH17O14917 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH17O14917 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDH17O14917 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH17O14917 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDH17O14917 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH17O14917 AC142381.4-202ENST00000563973 229 ntBASIC18.87■□□□□ 0.61
PCDH17O14917 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDH17O14917 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDH17O14917 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDH17O14917 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
PCDH17O14917 AC120498.8-201ENST00000614275 531 ntBASIC18.87■□□□□ 0.61
PCDH17O14917 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH17O14917 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
PCDH17O14917 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
PCDH17O14917 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDH17O14917 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH17O14917 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
PCDH17O14917 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH17O14917 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH17O14917 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH17O14917 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDH17O14917 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PCDH17O14917 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDH17O14917 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH17O14917 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
PCDH17O14917 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH17O14917 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH17O14917 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH17O14917 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH17O14917 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH17O14917 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
PCDH17O14917 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH17O14917 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDH17O14917 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.86■□□□□ 0.61
PCDH17O14917 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDH17O14917 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms