Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
CHD1O14646 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC32.37■■■□□ 2.77
CHD1O14646 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC32.37■■■□□ 2.77
CHD1O14646 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
CHD1O14646 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
CHD1O14646 FAAHP1-202ENST00000446499 1238 ntBASIC32.37■■■□□ 2.77
CHD1O14646 AC079781.3-201ENST00000449110 356 ntBASIC32.37■■■□□ 2.77
CHD1O14646 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
CHD1O14646 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
CHD1O14646 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC32.37■■■□□ 2.77
CHD1O14646 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC32.37■■■□□ 2.77
CHD1O14646 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC32.37■■■□□ 2.77
CHD1O14646 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
CHD1O14646 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
CHD1O14646 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC32.36■■■□□ 2.77
CHD1O14646 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC32.36■■■□□ 2.77
CHD1O14646 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC32.36■■■□□ 2.77
CHD1O14646 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
CHD1O14646 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
CHD1O14646 AP003041.3-201ENST00000527151 707 ntBASIC32.36■■■□□ 2.77
CHD1O14646 AL353719.1-201ENST00000566847 864 ntBASIC32.36■■■□□ 2.77
CHD1O14646 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC32.36■■■□□ 2.77
CHD1O14646 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC32.36■■■□□ 2.77
CHD1O14646 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC32.36■■■□□ 2.77
CHD1O14646 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
CHD1O14646 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
CHD1O14646 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
CHD1O14646 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC32.35■■■□□ 2.77
CHD1O14646 AL031432.5-201ENST00000641059 760 ntBASIC32.35■■■□□ 2.77
CHD1O14646 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC32.35■■■□□ 2.77
CHD1O14646 STK25-204ENST00000405585 1643 ntTSL 2 BASIC32.35■■■□□ 2.77
CHD1O14646 AC011484.1-201ENST00000377652 1995 ntBASIC32.35■■■□□ 2.77
CHD1O14646 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC32.35■■■□□ 2.77
CHD1O14646 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC32.34■■■□□ 2.77
CHD1O14646 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC32.34■■■□□ 2.77
CHD1O14646 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC32.34■■■□□ 2.77
CHD1O14646 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC32.34■■■□□ 2.77
CHD1O14646 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC32.34■■■□□ 2.77
CHD1O14646 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
CHD1O14646 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC32.34■■■□□ 2.77
CHD1O14646 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
CHD1O14646 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC32.34■■■□□ 2.77
CHD1O14646 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC32.34■■■□□ 2.77
CHD1O14646 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
CHD1O14646 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC32.34■■■□□ 2.77
CHD1O14646 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC32.34■■■□□ 2.77
CHD1O14646 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC32.33■■■□□ 2.77
CHD1O14646 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
CHD1O14646 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC32.33■■■□□ 2.77
CHD1O14646 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
CHD1O14646 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC32.33■■■□□ 2.77
CHD1O14646 Z85996.1-201ENST00000494644 937 ntBASIC32.33■■■□□ 2.77
CHD1O14646 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC32.33■■■□□ 2.77
CHD1O14646 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC32.33■■■□□ 2.77
CHD1O14646 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC32.33■■■□□ 2.77
CHD1O14646 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC32.33■■■□□ 2.77
CHD1O14646 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC32.33■■■□□ 2.77
CHD1O14646 MIR3180-1-201ENST00000580374 94 ntBASIC32.33■■■□□ 2.77
CHD1O14646 MIR3180-3-201ENST00000584616 94 ntBASIC32.33■■■□□ 2.77
CHD1O14646 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC32.33■■■□□ 2.77
CHD1O14646 STAC-204ENST00000457375 1366 ntTSL 2 BASIC32.33■■■□□ 2.77
CHD1O14646 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
CHD1O14646 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
CHD1O14646 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
CHD1O14646 TUBB8P6-201ENST00000436895 1288 ntBASIC32.32■■■□□ 2.76
CHD1O14646 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC32.32■■■□□ 2.76
CHD1O14646 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
CHD1O14646 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
CHD1O14646 LINC01311-201ENST00000565162 1445 ntBASIC32.32■■■□□ 2.76
CHD1O14646 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC32.32■■■□□ 2.76
CHD1O14646 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC32.32■■■□□ 2.76
CHD1O14646 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CHD1O14646 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
CHD1O14646 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC32.31■■■□□ 2.76
CHD1O14646 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC32.31■■■□□ 2.76
CHD1O14646 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CHD1O14646 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CHD1O14646 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
CHD1O14646 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC32.31■■■□□ 2.76
CHD1O14646 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC32.31■■■□□ 2.76
CHD1O14646 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC32.31■■■□□ 2.76
CHD1O14646 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC32.31■■■□□ 2.76
CHD1O14646 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
CHD1O14646 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC32.31■■■□□ 2.76
CHD1O14646 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC32.31■■■□□ 2.76
CHD1O14646 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC32.31■■■□□ 2.76
CHD1O14646 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
CHD1O14646 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC32.3■■■□□ 2.76
CHD1O14646 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
CHD1O14646 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC32.3■■■□□ 2.76
CHD1O14646 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC32.3■■■□□ 2.76
CHD1O14646 PPIH-202ENST00000372549 327 ntTSL 3 BASIC32.3■■■□□ 2.76
CHD1O14646 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC32.3■■■□□ 2.76
CHD1O14646 AL645929.1-201ENST00000420084 975 ntBASIC32.3■■■□□ 2.76
CHD1O14646 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC32.3■■■□□ 2.76
CHD1O14646 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC32.3■■■□□ 2.76
CHD1O14646 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CHD1O14646 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC32.3■■■□□ 2.76
CHD1O14646 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC32.29■■■□□ 2.76
CHD1O14646 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC32.29■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms