Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
UPK2O00526 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
UPK2O00526 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.88■□□□□ 0.13
UPK2O00526 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK2O00526 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK2O00526 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK2O00526 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK2O00526 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.88■□□□□ 0.13
UPK2O00526 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK2O00526 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK2O00526 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
UPK2O00526 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC15.88■□□□□ 0.13
UPK2O00526 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
UPK2O00526 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC15.88■□□□□ 0.13
UPK2O00526 MIR5787-201ENST00000611784 55 ntBASIC15.88■□□□□ 0.13
UPK2O00526 ANKRD20A6P-201ENST00000618763 204 ntBASIC15.88■□□□□ 0.13
UPK2O00526 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK2O00526 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK2O00526 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.88■□□□□ 0.13
UPK2O00526 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
UPK2O00526 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
UPK2O00526 AC018445.3-201ENST00000624177 1945 ntBASIC15.88■□□□□ 0.13
UPK2O00526 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC15.87■□□□□ 0.13
UPK2O00526 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK2O00526 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK2O00526 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK2O00526 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK2O00526 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK2O00526 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
UPK2O00526 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK2O00526 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
UPK2O00526 PHGDH-210ENST00000641115 1638 ntBASIC15.87■□□□□ 0.13
UPK2O00526 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK2O00526 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
UPK2O00526 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK2O00526 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.87■□□□□ 0.13
UPK2O00526 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK2O00526 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.87■□□□□ 0.13
UPK2O00526 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
UPK2O00526 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK2O00526 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK2O00526 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
UPK2O00526 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
UPK2O00526 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
UPK2O00526 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
UPK2O00526 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
UPK2O00526 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK2O00526 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK2O00526 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
UPK2O00526 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UPK2O00526 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.86■□□□□ 0.13
UPK2O00526 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UPK2O00526 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UPK2O00526 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
UPK2O00526 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
UPK2O00526 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UPK2O00526 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UPK2O00526 KRT17P1-201ENST00000399211 1546 ntBASIC15.86■□□□□ 0.13
UPK2O00526 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
UPK2O00526 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
UPK2O00526 AC093787.1-201ENST00000450396 207 ntBASIC15.86■□□□□ 0.13
UPK2O00526 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC15.86■□□□□ 0.13
UPK2O00526 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC15.86■□□□□ 0.13
UPK2O00526 AC005181.1-201ENST00000604782 1256 ntBASIC15.86■□□□□ 0.13
UPK2O00526 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC15.86■□□□□ 0.13
UPK2O00526 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC15.86■□□□□ 0.13
UPK2O00526 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
UPK2O00526 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UPK2O00526 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
UPK2O00526 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.86■□□□□ 0.13
UPK2O00526 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.86■□□□□ 0.13
UPK2O00526 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
UPK2O00526 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
UPK2O00526 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
UPK2O00526 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.86■□□□□ 0.13
UPK2O00526 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
UPK2O00526 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UPK2O00526 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UPK2O00526 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
UPK2O00526 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
UPK2O00526 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
UPK2O00526 AC087289.5-201ENST00000586076 3175 ntBASIC15.85■□□□□ 0.13
UPK2O00526 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
UPK2O00526 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
UPK2O00526 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UPK2O00526 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC15.85■□□□□ 0.13
UPK2O00526 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
UPK2O00526 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
UPK2O00526 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
UPK2O00526 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UPK2O00526 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
UPK2O00526 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
UPK2O00526 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.85■□□□□ 0.13
UPK2O00526 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UPK2O00526 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.85■□□□□ 0.13
UPK2O00526 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
UPK2O00526 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UPK2O00526 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
UPK2O00526 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UPK2O00526 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms