Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.12■□□□□ 0.97
O00370 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.12■□□□□ 0.97
O00370 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
O00370 AC008403.3-201ENST00000598924 454 ntBASIC21.12■□□□□ 0.97
O00370 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
O00370 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
O00370 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.12■□□□□ 0.97
O00370 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.12■□□□□ 0.97
O00370 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.12■□□□□ 0.97
O00370 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
O00370 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
O00370 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.12■□□□□ 0.97
O00370 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
O00370 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
O00370 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
O00370 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
O00370 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.11■□□□□ 0.97
O00370 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
O00370 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
O00370 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
O00370 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
O00370 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.11■□□□□ 0.97
O00370 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
O00370 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.11■□□□□ 0.97
O00370 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
O00370 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
O00370 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.11■□□□□ 0.97
O00370 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.11■□□□□ 0.97
O00370 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
O00370 AC125437.2-201ENST00000625180 2167 ntBASIC21.11■□□□□ 0.97
O00370 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.11■□□□□ 0.97
O00370 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
O00370 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.11■□□□□ 0.97
O00370 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.11■□□□□ 0.97
O00370 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
O00370 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
O00370 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
O00370 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
O00370 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
O00370 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.1■□□□□ 0.97
O00370 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
O00370 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.1■□□□□ 0.97
O00370 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
O00370 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.1■□□□□ 0.97
O00370 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
O00370 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
O00370 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.1■□□□□ 0.97
O00370 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.1■□□□□ 0.97
O00370 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
O00370 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.1■□□□□ 0.97
O00370 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.1■□□□□ 0.97
O00370 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.1■□□□□ 0.97
O00370 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.1■□□□□ 0.97
O00370 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
O00370 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.1■□□□□ 0.97
O00370 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
O00370 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
O00370 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
O00370 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.09■□□□□ 0.97
O00370 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
O00370 AC124283.5-201ENST00000624661 1809 ntBASIC21.09■□□□□ 0.97
O00370 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.09■□□□□ 0.97
O00370 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
O00370 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.09■□□□□ 0.97
O00370 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.09■□□□□ 0.97
O00370 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.09■□□□□ 0.97
O00370 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
O00370 AP003097.1-201ENST00000530657 1135 ntBASIC21.09■□□□□ 0.97
O00370 MIR4651-201ENST00000582622 73 ntBASIC21.09■□□□□ 0.97
O00370 AC008687.6-201ENST00000596318 630 ntBASIC21.09■□□□□ 0.97
O00370 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.09■□□□□ 0.97
O00370 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.09■□□□□ 0.97
O00370 AC120498.8-201ENST00000614275 531 ntBASIC21.09■□□□□ 0.97
O00370 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
O00370 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
O00370 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
O00370 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
O00370 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
O00370 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.09■□□□□ 0.97
O00370 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
O00370 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
O00370 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.09■□□□□ 0.97
O00370 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.09■□□□□ 0.97
O00370 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
O00370 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.08■□□□□ 0.97
O00370 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
O00370 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
O00370 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.08■□□□□ 0.97
O00370 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
O00370 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
O00370 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
O00370 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
O00370 RPS2P52-201ENST00000469610 820 ntBASIC21.08■□□□□ 0.97
O00370 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.08■□□□□ 0.97
O00370 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.08■□□□□ 0.97
O00370 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
O00370 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.08■□□□□ 0.97
O00370 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.08■□□□□ 0.96
O00370 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
O00370 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms