Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.04■□□□□ 0.64
CNOT1A5YKK6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.04■□□□□ 0.64
CNOT1A5YKK6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
CNOT1A5YKK6 IFNL4P1-201ENST00000607083 540 ntBASIC19.04■□□□□ 0.64
CNOT1A5YKK6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CNOT1A5YKK6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNOT1A5YKK6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.04■□□□□ 0.64
CNOT1A5YKK6 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.04■□□□□ 0.64
CNOT1A5YKK6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNOT1A5YKK6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNOT1A5YKK6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNOT1A5YKK6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNOT1A5YKK6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.04■□□□□ 0.64
CNOT1A5YKK6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNOT1A5YKK6 YBX1P10-201ENST00000444752 975 ntBASIC19.04■□□□□ 0.64
CNOT1A5YKK6 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CNOT1A5YKK6 VENTXP5-201ENST00000523979 775 ntBASIC19.04■□□□□ 0.64
CNOT1A5YKK6 AC140113.3-201ENST00000605663 199 ntBASIC19.04■□□□□ 0.64
CNOT1A5YKK6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CNOT1A5YKK6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CNOT1A5YKK6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.03■□□□□ 0.64
CNOT1A5YKK6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNOT1A5YKK6 AC004951.3-201ENST00000418645 1148 ntBASIC19.03■□□□□ 0.64
CNOT1A5YKK6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNOT1A5YKK6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
CNOT1A5YKK6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CNOT1A5YKK6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.03■□□□□ 0.64
CNOT1A5YKK6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.03■□□□□ 0.64
CNOT1A5YKK6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CNOT1A5YKK6 MFAP1P1-201ENST00000442257 1255 ntBASIC19.03■□□□□ 0.64
CNOT1A5YKK6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.03■□□□□ 0.64
CNOT1A5YKK6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.03■□□□□ 0.64
CNOT1A5YKK6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CNOT1A5YKK6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CNOT1A5YKK6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
CNOT1A5YKK6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.02■□□□□ 0.64
CNOT1A5YKK6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNOT1A5YKK6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.02■□□□□ 0.64
CNOT1A5YKK6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CNOT1A5YKK6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.02■□□□□ 0.64
CNOT1A5YKK6 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNOT1A5YKK6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.02■□□□□ 0.64
CNOT1A5YKK6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.02■□□□□ 0.64
CNOT1A5YKK6 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.02■□□□□ 0.64
CNOT1A5YKK6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.02■□□□□ 0.64
CNOT1A5YKK6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CNOT1A5YKK6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CNOT1A5YKK6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.02■□□□□ 0.63
CNOT1A5YKK6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.02■□□□□ 0.63
CNOT1A5YKK6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CNOT1A5YKK6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.02■□□□□ 0.63
CNOT1A5YKK6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CNOT1A5YKK6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT1A5YKK6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.01■□□□□ 0.63
CNOT1A5YKK6 PRSS44-201ENST00000515154 1146 ntBASIC19.01■□□□□ 0.63
CNOT1A5YKK6 AL031432.5-201ENST00000641059 760 ntBASIC19.01■□□□□ 0.63
CNOT1A5YKK6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT1A5YKK6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT1A5YKK6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT1A5YKK6 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT1A5YKK6 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.01■□□□□ 0.63
CNOT1A5YKK6 AC008040.2-201ENST00000461049 708 ntBASIC19.01■□□□□ 0.63
CNOT1A5YKK6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.01■□□□□ 0.63
CNOT1A5YKK6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.01■□□□□ 0.63
CNOT1A5YKK6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT1A5YKK6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.01■□□□□ 0.63
CNOT1A5YKK6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.01■□□□□ 0.63
CNOT1A5YKK6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CNOT1A5YKK6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT1A5YKK6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.01■□□□□ 0.63
CNOT1A5YKK6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CNOT1A5YKK6 TSPY17P-201ENST00000450329 467 ntBASIC19■□□□□ 0.63
CNOT1A5YKK6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19■□□□□ 0.63
CNOT1A5YKK6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CNOT1A5YKK6 AP006587.1-201ENST00000534129 1502 ntBASIC19■□□□□ 0.63
CNOT1A5YKK6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CNOT1A5YKK6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNOT1A5YKK6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNOT1A5YKK6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNOT1A5YKK6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19■□□□□ 0.63
CNOT1A5YKK6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19■□□□□ 0.63
CNOT1A5YKK6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNOT1A5YKK6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CNOT1A5YKK6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19■□□□□ 0.63
CNOT1A5YKK6 ATP5G2P1-201ENST00000433580 426 ntBASIC19■□□□□ 0.63
CNOT1A5YKK6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19■□□□□ 0.63
CNOT1A5YKK6 AL512604.3-201ENST00000569583 964 ntBASIC19■□□□□ 0.63
CNOT1A5YKK6 NPAP1P7-201ENST00000613027 823 ntBASIC19■□□□□ 0.63
CNOT1A5YKK6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19■□□□□ 0.63
CNOT1A5YKK6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNOT1A5YKK6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19■□□□□ 0.63
CNOT1A5YKK6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNOT1A5YKK6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNOT1A5YKK6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.99■□□□□ 0.63
CNOT1A5YKK6 AL022342.1-201ENST00000400363 863 ntBASIC18.99■□□□□ 0.63
CNOT1A5YKK6 SLC25A1P2-201ENST00000430693 912 ntBASIC18.99■□□□□ 0.63
CNOT1A5YKK6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CNOT1A5YKK6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
CNOT1A5YKK6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.99■□□□□ 0.63
CNOT1A5YKK6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms