Protein–RNA interactions for Protein: A4D1U4

LCHN, Protein LCHN, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCHNA4D1U4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.33■■□□□ 1
LCHNA4D1U4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.33■■□□□ 1
LCHNA4D1U4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.33■■□□□ 1
LCHNA4D1U4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
LCHNA4D1U4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.32■■□□□ 1
LCHNA4D1U4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.32■■□□□ 1
LCHNA4D1U4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.32■■□□□ 1
LCHNA4D1U4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.32■■□□□ 1
LCHNA4D1U4 AC004980.1-204ENST00000429707 299 ntBASIC21.32■■□□□ 1
LCHNA4D1U4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.32■■□□□ 1
LCHNA4D1U4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.32■■□□□ 1
LCHNA4D1U4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.32■■□□□ 1
LCHNA4D1U4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.32■■□□□ 1
LCHNA4D1U4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
LCHNA4D1U4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.32■■□□□ 1
LCHNA4D1U4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.32■■□□□ 1
LCHNA4D1U4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LCHNA4D1U4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
LCHNA4D1U4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LCHNA4D1U4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.31■■□□□ 1
LCHNA4D1U4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LCHNA4D1U4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
LCHNA4D1U4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LCHNA4D1U4 AL031133.1-201ENST00000406807 723 ntBASIC21.31■■□□□ 1
LCHNA4D1U4 AC091390.4-202ENST00000476426 537 ntBASIC21.31■■□□□ 1
LCHNA4D1U4 KRT18P56-201ENST00000507275 550 ntBASIC21.31■■□□□ 1
LCHNA4D1U4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.31■■□□□ 1
LCHNA4D1U4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
LCHNA4D1U4 AC139887.4-201ENST00000607877 719 ntBASIC21.31■■□□□ 1
LCHNA4D1U4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.31■■□□□ 1
LCHNA4D1U4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
LCHNA4D1U4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LCHNA4D1U4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.31■■□□□ 1
LCHNA4D1U4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.31■■□□□ 1
LCHNA4D1U4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.31■■□□□ 1
LCHNA4D1U4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.31■■□□□ 1
LCHNA4D1U4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.31■■□□□ 1
LCHNA4D1U4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.31■■□□□ 1
LCHNA4D1U4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LCHNA4D1U4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.3■■□□□ 1
LCHNA4D1U4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
LCHNA4D1U4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
LCHNA4D1U4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
LCHNA4D1U4 AC128688.1-201ENST00000487626 519 ntBASIC21.3■■□□□ 1
LCHNA4D1U4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.3■■□□□ 1
LCHNA4D1U4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.3■■□□□ 1
LCHNA4D1U4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.3■■□□□ 1
LCHNA4D1U4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.3■■□□□ 1
LCHNA4D1U4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.3■■□□□ 1
LCHNA4D1U4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.3■■□□□ 1
LCHNA4D1U4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
LCHNA4D1U4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.3■■□□□ 1
LCHNA4D1U4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
LCHNA4D1U4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LCHNA4D1U4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.29■■□□□ 1
LCHNA4D1U4 AP006587.1-201ENST00000534129 1502 ntBASIC21.29■■□□□ 1
LCHNA4D1U4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
LCHNA4D1U4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.29■■□□□ 1
LCHNA4D1U4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.29■■□□□ 1
LCHNA4D1U4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.29■■□□□ 1
LCHNA4D1U4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LCHNA4D1U4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
LCHNA4D1U4 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.29■■□□□ 1
LCHNA4D1U4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.29■■□□□ 1
LCHNA4D1U4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.29■■□□□ 1
LCHNA4D1U4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LCHNA4D1U4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LCHNA4D1U4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LCHNA4D1U4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.29■■□□□ 1
LCHNA4D1U4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.29■■□□□ 1
LCHNA4D1U4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.29■■□□□ 1
LCHNA4D1U4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.29■■□□□ 1
LCHNA4D1U4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LCHNA4D1U4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.29■■□□□ 1
LCHNA4D1U4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.29■■□□□ 1
LCHNA4D1U4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.29■■□□□ 1
LCHNA4D1U4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.29■■□□□ 1
LCHNA4D1U4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LCHNA4D1U4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LCHNA4D1U4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.28■■□□□ 1
LCHNA4D1U4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.28■■□□□ 1
LCHNA4D1U4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.28■■□□□ 1
LCHNA4D1U4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LCHNA4D1U4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
LCHNA4D1U4 FAM8A6P-201ENST00000407496 1135 ntBASIC21.28■■□□□ 1
LCHNA4D1U4 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LCHNA4D1U4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.28■■□□□ 1
LCHNA4D1U4 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.28■■□□□ 1
LCHNA4D1U4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.28■■□□□ 1
LCHNA4D1U4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
LCHNA4D1U4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.28■■□□□ 1
LCHNA4D1U4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.28■■□□□ 1
LCHNA4D1U4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.28■■□□□ 1
LCHNA4D1U4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.28■■□□□ 1
LCHNA4D1U4 LINC01238-205ENST00000567549 1107 ntBASIC21.28■■□□□ 1
LCHNA4D1U4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.28■■□□□ 1
LCHNA4D1U4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.28■■□□□ 1
LCHNA4D1U4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.28■■□□□ 1
LCHNA4D1U4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.27■■□□□ 1
LCHNA4D1U4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms