Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV25A0A0B4J276 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV25A0A0B4J276 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TRAV25A0A0B4J276 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV25A0A0B4J276 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TRAV25A0A0B4J276 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV25A0A0B4J276 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV25A0A0B4J276 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV25A0A0B4J276 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV25A0A0B4J276 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV25A0A0B4J276 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV25A0A0B4J276 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV25A0A0B4J276 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV25A0A0B4J276 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV25A0A0B4J276 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRAV25A0A0B4J276 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV25A0A0B4J276 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV25A0A0B4J276 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRAV25A0A0B4J276 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV25A0A0B4J276 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV25A0A0B4J276 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV25A0A0B4J276 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV25A0A0B4J276 AC239809.2-201ENST00000415381 517 ntBASIC14.88□□□□□ -0.03
TRAV25A0A0B4J276 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV25A0A0B4J276 AC133681.1-201ENST00000465482 601 ntBASIC14.88□□□□□ -0.03
TRAV25A0A0B4J276 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
TRAV25A0A0B4J276 PNN-205ENST00000556530 601 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV25A0A0B4J276 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV25A0A0B4J276 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV25A0A0B4J276 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV25A0A0B4J276 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRAV25A0A0B4J276 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV25A0A0B4J276 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV25A0A0B4J276 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TRAV25A0A0B4J276 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
TRAV25A0A0B4J276 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV25A0A0B4J276 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV25A0A0B4J276 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV25A0A0B4J276 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV25A0A0B4J276 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV25A0A0B4J276 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV25A0A0B4J276 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV25A0A0B4J276 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAV25A0A0B4J276 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV25A0A0B4J276 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV25A0A0B4J276 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV25A0A0B4J276 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC14.87□□□□□ -0.03
TRAV25A0A0B4J276 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.87□□□□□ -0.03
TRAV25A0A0B4J276 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.87□□□□□ -0.03
TRAV25A0A0B4J276 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.87□□□□□ -0.03
TRAV25A0A0B4J276 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC14.87□□□□□ -0.03
TRAV25A0A0B4J276 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV25A0A0B4J276 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV25A0A0B4J276 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV25A0A0B4J276 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAV25A0A0B4J276 AC018553.1-201ENST00000616682 1458 ntBASIC14.87□□□□□ -0.03
TRAV25A0A0B4J276 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRAV25A0A0B4J276 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV25A0A0B4J276 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV25A0A0B4J276 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRAV25A0A0B4J276 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV25A0A0B4J276 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TRAV25A0A0B4J276 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV25A0A0B4J276 TFP1-202ENST00000475455 1573 ntBASIC14.86□□□□□ -0.03
TRAV25A0A0B4J276 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV25A0A0B4J276 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV25A0A0B4J276 PRORSD1P-201ENST00000295112 541 ntBASIC14.86□□□□□ -0.03
TRAV25A0A0B4J276 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV25A0A0B4J276 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.86□□□□□ -0.03
TRAV25A0A0B4J276 C1QBPP2-201ENST00000528754 825 ntBASIC14.86□□□□□ -0.03
TRAV25A0A0B4J276 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV25A0A0B4J276 AC142381.4-202ENST00000563973 229 ntBASIC14.86□□□□□ -0.03
TRAV25A0A0B4J276 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.86□□□□□ -0.03
TRAV25A0A0B4J276 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV25A0A0B4J276 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV25A0A0B4J276 AC004264.1-201ENST00000608354 794 ntBASIC14.86□□□□□ -0.03
TRAV25A0A0B4J276 AC110285.5-201ENST00000611501 352 ntBASIC14.86□□□□□ -0.03
TRAV25A0A0B4J276 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRAV25A0A0B4J276 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC14.86□□□□□ -0.03
TRAV25A0A0B4J276 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 RPPH1-201ENST00000516869 333 ntBASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 LY6E-205ENST00000519611 635 ntTSL 3 BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC14.85□□□□□ -0.03
TRAV25A0A0B4J276 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms