Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
TRAV5A0A0B4J249 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV5A0A0B4J249 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV5A0A0B4J249 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV5A0A0B4J249 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV5A0A0B4J249 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV5A0A0B4J249 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
TRAV5A0A0B4J249 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV5A0A0B4J249 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV5A0A0B4J249 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV5A0A0B4J249 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV5A0A0B4J249 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV5A0A0B4J249 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
TRAV5A0A0B4J249 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV5A0A0B4J249 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV5A0A0B4J249 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV5A0A0B4J249 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV5A0A0B4J249 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV5A0A0B4J249 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRAV5A0A0B4J249 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV5A0A0B4J249 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV5A0A0B4J249 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
TRAV5A0A0B4J249 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC15.37■□□□□ 0.05
TRAV5A0A0B4J249 SLC7A5P1-201ENST00000568957 537 ntBASIC15.37■□□□□ 0.05
TRAV5A0A0B4J249 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.37■□□□□ 0.05
TRAV5A0A0B4J249 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRAV5A0A0B4J249 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV5A0A0B4J249 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV5A0A0B4J249 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TRAV5A0A0B4J249 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV5A0A0B4J249 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV5A0A0B4J249 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV5A0A0B4J249 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV5A0A0B4J249 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC15.36■□□□□ 0.05
TRAV5A0A0B4J249 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV5A0A0B4J249 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV5A0A0B4J249 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRAV5A0A0B4J249 AC009237.14-201ENST00000609975 1594 ntBASIC15.36■□□□□ 0.05
TRAV5A0A0B4J249 AL032819.2-201ENST00000624543 2162 ntBASIC15.36■□□□□ 0.05
TRAV5A0A0B4J249 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TRAV5A0A0B4J249 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV5A0A0B4J249 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV5A0A0B4J249 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV5A0A0B4J249 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV5A0A0B4J249 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV5A0A0B4J249 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
TRAV5A0A0B4J249 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC15.36■□□□□ 0.05
TRAV5A0A0B4J249 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TRAV5A0A0B4J249 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV5A0A0B4J249 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV5A0A0B4J249 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV5A0A0B4J249 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV5A0A0B4J249 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TRAV5A0A0B4J249 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 AC087633.2-202ENST00000565166 1439 ntBASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV5A0A0B4J249 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 NEFHP1-201ENST00000412845 2629 ntBASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 PGM5P4-201ENST00000421970 445 ntBASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 AC097381.1-201ENST00000429019 1296 ntBASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms