Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 HCRTR2-201ENST00000370862 1837 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
USB1Q9BQ65 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 OR51G2-201ENST00000322013 1023 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 RNU6-462P-201ENST00000362659 105 ntBASIC7.95□□□□□ -1.14
USB1Q9BQ65 BPIFA1-202ENST00000375413 1026 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
USB1Q9BQ65 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 AL031864.1-201ENST00000392075 423 ntBASIC7.95□□□□□ -1.14
USB1Q9BQ65 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
USB1Q9BQ65 APLF-202ENST00000394342 1182 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
USB1Q9BQ65 FAM213AP1-201ENST00000418757 668 ntBASIC7.95□□□□□ -1.14
USB1Q9BQ65 GAPDHP49-201ENST00000421421 961 ntBASIC7.95□□□□□ -1.14
USB1Q9BQ65 LINC01399-201ENST00000423311 648 ntTSL 3 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 RPL13AP7-201ENST00000425147 611 ntBASIC7.95□□□□□ -1.14
USB1Q9BQ65 SNX19-202ENST00000426933 888 ntTSL 2 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 AC007559.1-201ENST00000428736 355 ntBASIC7.95□□□□□ -1.14
USB1Q9BQ65 CHCHD4P2-201ENST00000431135 420 ntBASIC7.95□□□□□ -1.14
USB1Q9BQ65 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 AP000532.1-201ENST00000440999 177 ntBASIC7.95□□□□□ -1.14
USB1Q9BQ65 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 AC006480.1-201ENST00000449887 378 ntBASIC7.95□□□□□ -1.14
USB1Q9BQ65 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 AC135721.2-201ENST00000464237 300 ntBASIC7.95□□□□□ -1.14
USB1Q9BQ65 MPTX1-201ENST00000480235 609 ntBASIC7.95□□□□□ -1.14
USB1Q9BQ65 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 MTND6P25-201ENST00000528711 516 ntBASIC7.95□□□□□ -1.14
USB1Q9BQ65 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 AC010768.2-201ENST00000532524 567 ntTSL 4 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
USB1Q9BQ65 CASP1-216ENST00000534497 825 ntTSL 5 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 ASB8-211ENST00000539528 839 ntTSL 3 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 AC006927.1-201ENST00000544818 498 ntBASIC7.95□□□□□ -1.14
USB1Q9BQ65 PCED1B-AS1-206ENST00000550426 683 ntTSL 5 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 PCED1B-AS1-211ENST00000552990 654 ntTSL 3 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 RPL21P5-201ENST00000554662 472 ntBASIC7.95□□□□□ -1.14
USB1Q9BQ65 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 AC007907.1-201ENST00000557953 451 ntTSL 3 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 AC093249.1-201ENST00000567049 203 ntBASIC7.95□□□□□ -1.14
USB1Q9BQ65 AC073878.1-201ENST00000567503 474 ntTSL 3 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 AC103810.2-201ENST00000577938 559 ntTSL 5 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 AC103949.1-201ENST00000582064 457 ntTSL 3 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 PDLIM1P2-201ENST00000582923 607 ntBASIC7.95□□□□□ -1.14
USB1Q9BQ65 AC119751.8-201ENST00000597032 156 ntBASIC7.95□□□□□ -1.14
USB1Q9BQ65 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 AL645949.1-202ENST00000600073 242 ntBASIC7.95□□□□□ -1.14
USB1Q9BQ65 AC112187.2-201ENST00000604345 283 ntBASIC7.95□□□□□ -1.14
USB1Q9BQ65 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 GNAS-AS1_5.1-201ENST00000614281 121 ntBASIC7.95□□□□□ -1.14
USB1Q9BQ65 AC104010.1-201ENST00000616889 150 ntBASIC7.95□□□□□ -1.14
USB1Q9BQ65 SPDYE20P-201ENST00000616891 632 ntBASIC7.95□□□□□ -1.14
USB1Q9BQ65 GPC6-202ENST00000617456 792 ntTSL 3 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 AP001442.1-201ENST00000617755 659 ntTSL 5 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 AC090971.5-201ENST00000621102 293 ntBASIC7.95□□□□□ -1.14
USB1Q9BQ65 AC247036.7-201ENST00000639643 304 ntBASIC7.95□□□□□ -1.14
USB1Q9BQ65 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
USB1Q9BQ65 LRRC66-201ENST00000343457 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
USB1Q9BQ65 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 HAUS2-201ENST00000260372 3949 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
USB1Q9BQ65 EFTUD2-223ENST00000592576 3364 ntTSL 2 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 NXF5-205ENST00000473265 1348 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
USB1Q9BQ65 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC7.95□□□□□ -1.14
USB1Q9BQ65 ADD2-204ENST00000407644 3741 ntAPPRIS P4 TSL 1 (best) BASIC7.95□□□□□ -1.14
USB1Q9BQ65 C3P1-202ENST00000497718 4954 ntBASIC7.95□□□□□ -1.14
USB1Q9BQ65 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
USB1Q9BQ65 TTC23-203ENST00000394132 3849 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
USB1Q9BQ65 MLH1-216ENST00000458205 2608 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
USB1Q9BQ65 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
USB1Q9BQ65 MICAL3-219ENST00000585038 3323 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
USB1Q9BQ65 AC010928.1-201ENST00000592477 1447 ntBASIC7.95□□□□□ -1.14
USB1Q9BQ65 FKBP14-201ENST00000222803 4960 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
USB1Q9BQ65 EPHB2-201ENST00000374627 4014 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 RABGEF1-201ENST00000284957 3733 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
USB1Q9BQ65 ATP7B-215ENST00000634844 4398 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
USB1Q9BQ65 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 CDR1-202ENST00000625883 1485 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 SLC19A3-201ENST00000258403 3105 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
USB1Q9BQ65 ICE2P1-201ENST00000512800 1849 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 TMBIM6-201ENST00000267115 2836 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
USB1Q9BQ65 MTERF4-222ENST00000614476 4524 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
USB1Q9BQ65 GCNT2-216ENST00000495262 2214 ntAPPRIS ALT1 TSL 2 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
USB1Q9BQ65 KLRC1-203ENST00000408006 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
USB1Q9BQ65 DOCK11-202ENST00000276204 6664 ntAPPRIS ALT1 TSL 5 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 SLC8A1-202ENST00000402441 3065 ntTSL 2 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 NASP-224ENST00000537798 3097 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 OR5P1P-201ENST00000299512 925 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 RNU6-533P-201ENST00000384144 107 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 MIR637-201ENST00000385000 99 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 MIR559-201ENST00000385188 96 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 AL024509.1-201ENST00000397093 927 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 AL590286.1-201ENST00000404178 291 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 TUBB4BP7-201ENST00000406999 1234 ntBASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms